Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC10Q9NYD6 AC087289.5-201ENST00000586076 3175 ntBASIC19.82■□□□□ 0.76
HOXC10Q9NYD6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC10Q9NYD6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXC10Q9NYD6 AC006116.8-202ENST00000587620 1550 ntBASIC19.82■□□□□ 0.76
HOXC10Q9NYD6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC10Q9NYD6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC10Q9NYD6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXC10Q9NYD6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC10Q9NYD6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 AC092919.2-201ENST00000623631 1645 ntBASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 AL139400.1-201ENST00000366220 510 ntBASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 HLA-J-203ENST00000494367 1087 ntBASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 AC004449.1-201ENST00000564240 433 ntBASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 AL645728.2-201ENST00000641974 660 ntBASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 BICD1-207ENST00000551848 1962 ntBASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC10Q9NYD6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 AC106028.4-201ENST00000614509 607 ntBASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 AC020763.4-201ENST00000623414 4170 ntBASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC10Q9NYD6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC10Q9NYD6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC10Q9NYD6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC10Q9NYD6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC10Q9NYD6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC10Q9NYD6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC10Q9NYD6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXC10Q9NYD6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC10Q9NYD6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC10Q9NYD6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
HOXC10Q9NYD6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms