Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 AL138781.2-201ENST00000617896 1843 ntBASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
SLC52A1Q9NWF4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 TREML5P-201ENST00000421694 576 ntBASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 AC008761.3-201ENST00000624803 892 ntBASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC24.66■■□□□ 1.54
SLC52A1Q9NWF4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 SLC25A24-204ENST00000569674 2357 ntBASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 SLC25A39P2-201ENST00000537614 270 ntBASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SLC52A1Q9NWF4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 AC138028.4-201ENST00000564984 1845 ntBASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 LINC02560-201ENST00000596379 459 ntBASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC24.64■■□□□ 1.54
SLC52A1Q9NWF4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms