Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.37■□□□□ 0.53
TLR9Q9NR96 AC092474.2-201ENST00000424288 719 ntBASIC18.37■□□□□ 0.53
TLR9Q9NR96 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.37■□□□□ 0.53
TLR9Q9NR96 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.37■□□□□ 0.53
TLR9Q9NR96 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
TLR9Q9NR96 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.37■□□□□ 0.53
TLR9Q9NR96 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.37■□□□□ 0.53
TLR9Q9NR96 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TLR9Q9NR96 ACTL9-202ENST00000612068 1252 ntBASIC18.37■□□□□ 0.53
TLR9Q9NR96 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TLR9Q9NR96 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.37■□□□□ 0.53
TLR9Q9NR96 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.37■□□□□ 0.53
TLR9Q9NR96 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.37■□□□□ 0.53
TLR9Q9NR96 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TLR9Q9NR96 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.37■□□□□ 0.53
TLR9Q9NR96 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TLR9Q9NR96 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TLR9Q9NR96 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TLR9Q9NR96 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TLR9Q9NR96 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TLR9Q9NR96 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 ADH5P3-201ENST00000433842 1137 ntBASIC18.36■□□□□ 0.53
TLR9Q9NR96 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TLR9Q9NR96 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TLR9Q9NR96 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TLR9Q9NR96 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TLR9Q9NR96 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TLR9Q9NR96 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.36■□□□□ 0.53
TLR9Q9NR96 AC005498.2-205ENST00000593218 784 ntBASIC18.36■□□□□ 0.53
TLR9Q9NR96 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TLR9Q9NR96 AC005332.8-201ENST00000622750 2735 ntBASIC18.36■□□□□ 0.53
TLR9Q9NR96 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TLR9Q9NR96 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TLR9Q9NR96 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TLR9Q9NR96 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TLR9Q9NR96 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TLR9Q9NR96 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TLR9Q9NR96 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TLR9Q9NR96 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TLR9Q9NR96 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TLR9Q9NR96 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TLR9Q9NR96 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TLR9Q9NR96 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 AC002056.1-201ENST00000395613 760 ntBASIC18.35■□□□□ 0.53
TLR9Q9NR96 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 TIMM8BP1-201ENST00000452384 211 ntBASIC18.35■□□□□ 0.53
TLR9Q9NR96 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TLR9Q9NR96 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TLR9Q9NR96 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TLR9Q9NR96 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TLR9Q9NR96 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TLR9Q9NR96 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TLR9Q9NR96 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TLR9Q9NR96 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TLR9Q9NR96 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TLR9Q9NR96 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms