Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 AC109462.3-201ENST00000573934 613 ntBASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NEUROD4Q9HD90 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NEUROD4Q9HD90 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
NEUROD4Q9HD90 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NEUROD4Q9HD90 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NEUROD4Q9HD90 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
NEUROD4Q9HD90 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.46■□□□□ 0.22
NEUROD4Q9HD90 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 AC009533.2-201ENST00000543664 586 ntBASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 AC005332.1-201ENST00000577698 1310 ntBASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NEUROD4Q9HD90 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 AC009053.2-201ENST00000563701 2365 ntBASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 AC046185.3-201ENST00000623228 1824 ntBASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms