Protein–RNA interactions for Protein: Q9H4Q4

PRDM12, PR domain zinc finger protein 12, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM12Q9H4Q4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRDM12Q9H4Q4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
PRDM12Q9H4Q4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRDM12Q9H4Q4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.83■□□□□ 0.61
PRDM12Q9H4Q4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.83■□□□□ 0.61
PRDM12Q9H4Q4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
PRDM12Q9H4Q4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRDM12Q9H4Q4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 AC018470.1-201ENST00000624790 3129 ntBASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 TSPY16P-201ENST00000449843 468 ntBASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 AC067863.1-201ENST00000494933 530 ntBASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 AC023141.13-201ENST00000604991 943 ntBASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 AC007064.4-201ENST00000637740 555 ntBASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PRDM12Q9H4Q4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 MIR661-201ENST00000384842 89 ntBASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 MEIS3P1-201ENST00000495167 958 ntBASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 REXO1L3P-201ENST00000622202 1288 ntBASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 NOC2LP1-202ENST00000452600 2235 ntBASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PRDM12Q9H4Q4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PRDM12Q9H4Q4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRDM12Q9H4Q4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRDM12Q9H4Q4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRDM12Q9H4Q4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PRDM12Q9H4Q4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
PRDM12Q9H4Q4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRDM12Q9H4Q4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRDM12Q9H4Q4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms