Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 AC006116.8-202ENST00000587620 1550 ntBASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 CRB3P1-201ENST00000449338 276 ntBASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 CXCL1P1-201ENST00000502804 216 ntBASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 SLC25A39P2-201ENST00000537614 270 ntBASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2OQ9C0C9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 AC092919.2-201ENST00000623631 1645 ntBASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 AC107890.1-201ENST00000422478 521 ntBASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 IGHV3-42-201ENST00000520410 361 ntBASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 AC026120.1-201ENST00000611536 926 ntBASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2OQ9C0C9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 AC132938.5-201ENST00000624980 1813 ntBASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 KLF4P1-201ENST00000412782 1185 ntBASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 AL512638.1-201ENST00000457493 794 ntBASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 AC069335.1-201ENST00000489972 472 ntBASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.1■□□□□ 0.65
UBE2OQ9C0C9 AL390754.1-201ENST00000619088 582 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms