Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 TSSC2-201ENST00000450217 709 ntBASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF4Q9BSR8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 AC109462.3-201ENST00000573934 613 ntBASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 AP005901.3-202ENST00000581653 237 ntBASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 AL138831.2-201ENST00000606564 490 ntBASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.4■□□□□ 0.22
YIPF4Q9BSR8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
YIPF4Q9BSR8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.39■□□□□ 0.21
YIPF4Q9BSR8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms