Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PHOX2BQ99453 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHOX2BQ99453 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PHOX2BQ99453 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHOX2BQ99453 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PHOX2BQ99453 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHOX2BQ99453 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 KRT8P47-201ENST00000604727 1398 ntBASIC17.57■□□□□ 0.4
PHOX2BQ99453 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PHOX2BQ99453 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHOX2BQ99453 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHOX2BQ99453 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PHOX2BQ99453 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 AC004945.1-201ENST00000416738 983 ntBASIC17.57■□□□□ 0.4
PHOX2BQ99453 AC007967.3-201ENST00000434308 558 ntBASIC17.57■□□□□ 0.4
PHOX2BQ99453 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 AC068137.2-201ENST00000605408 478 ntBASIC17.57■□□□□ 0.4
PHOX2BQ99453 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHOX2BQ99453 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PHOX2BQ99453 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHOX2BQ99453 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
PHOX2BQ99453 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PHOX2BQ99453 FP475955.4-201ENST00000623131 1990 ntBASIC17.57■□□□□ 0.4
PHOX2BQ99453 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHOX2BQ99453 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 ADH5P3-201ENST00000433842 1137 ntBASIC17.56■□□□□ 0.4
PHOX2BQ99453 AC005237.2-201ENST00000434368 219 ntBASIC17.56■□□□□ 0.4
PHOX2BQ99453 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 AC125807.1-201ENST00000483097 614 ntBASIC17.56■□□□□ 0.4
PHOX2BQ99453 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 AC007064.4-201ENST00000637740 555 ntBASIC17.56■□□□□ 0.4
PHOX2BQ99453 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 AC141586.3-201ENST00000562166 1838 ntBASIC17.56■□□□□ 0.4
PHOX2BQ99453 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PHOX2BQ99453 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHOX2BQ99453 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHOX2BQ99453 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHOX2BQ99453 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHOX2BQ99453 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHOX2BQ99453 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHOX2BQ99453 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHOX2BQ99453 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 AC006116.8-202ENST00000587620 1550 ntBASIC17.55■□□□□ 0.4
PHOX2BQ99453 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHOX2BQ99453 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 AL512638.1-201ENST00000457493 794 ntBASIC17.55■□□□□ 0.4
PHOX2BQ99453 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHOX2BQ99453 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms