Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
SPENQ96T58 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPENQ96T58 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPENQ96T58 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.54■□□□□ 0.08
SPENQ96T58 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SPENQ96T58 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPENQ96T58 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.54■□□□□ 0.08
SPENQ96T58 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.54■□□□□ 0.08
SPENQ96T58 AL008721.1-201ENST00000609964 604 ntBASIC15.54■□□□□ 0.08
SPENQ96T58 TNXA-203ENST00000507684 2038 ntBASIC15.54■□□□□ 0.08
SPENQ96T58 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SPENQ96T58 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.54■□□□□ 0.08
SPENQ96T58 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.54■□□□□ 0.08
SPENQ96T58 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPENQ96T58 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.54■□□□□ 0.08
SPENQ96T58 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPENQ96T58 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.54■□□□□ 0.08
SPENQ96T58 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.54■□□□□ 0.08
SPENQ96T58 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.54■□□□□ 0.08
SPENQ96T58 AL132655.2-201ENST00000596276 594 ntBASIC15.54■□□□□ 0.08
SPENQ96T58 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.54■□□□□ 0.08
SPENQ96T58 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPENQ96T58 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.54■□□□□ 0.08
SPENQ96T58 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SPENQ96T58 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPENQ96T58 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SPENQ96T58 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SPENQ96T58 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SPENQ96T58 RN7SL589P-201ENST00000481268 310 ntBASIC15.54■□□□□ 0.08
SPENQ96T58 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.54■□□□□ 0.08
SPENQ96T58 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SPENQ96T58 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.53■□□□□ 0.08
SPENQ96T58 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SPENQ96T58 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.53■□□□□ 0.08
SPENQ96T58 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SPENQ96T58 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.53■□□□□ 0.08
SPENQ96T58 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.53■□□□□ 0.08
SPENQ96T58 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.53■□□□□ 0.08
SPENQ96T58 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SPENQ96T58 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 SPDYE11-202ENST00000450699 704 ntBASIC15.53■□□□□ 0.08
SPENQ96T58 CXCL1P1-201ENST00000502804 216 ntBASIC15.53■□□□□ 0.08
SPENQ96T58 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SPENQ96T58 AC097493.3-201ENST00000509725 367 ntBASIC15.53■□□□□ 0.08
SPENQ96T58 AC004449.1-201ENST00000564240 433 ntBASIC15.53■□□□□ 0.08
SPENQ96T58 SPDYE9P-201ENST00000570642 692 ntBASIC15.53■□□□□ 0.08
SPENQ96T58 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.53■□□□□ 0.08
SPENQ96T58 SPDYE10P-202ENST00000612005 668 ntBASIC15.53■□□□□ 0.08
SPENQ96T58 SPDYE8P-202ENST00000612377 668 ntBASIC15.53■□□□□ 0.08
SPENQ96T58 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.53■□□□□ 0.08
SPENQ96T58 AL033527.4-201ENST00000641026 673 ntBASIC15.53■□□□□ 0.08
SPENQ96T58 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SPENQ96T58 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.53■□□□□ 0.08
SPENQ96T58 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.53■□□□□ 0.08
SPENQ96T58 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.53■□□□□ 0.08
SPENQ96T58 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SPENQ96T58 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.53■□□□□ 0.08
SPENQ96T58 KRT18P32-201ENST00000424695 1287 ntBASIC15.53■□□□□ 0.08
SPENQ96T58 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.53■□□□□ 0.08
SPENQ96T58 RNA5SP421-201ENST00000516864 134 ntBASIC15.53■□□□□ 0.08
SPENQ96T58 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.53■□□□□ 0.08
SPENQ96T58 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SPENQ96T58 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.52■□□□□ 0.08
SPENQ96T58 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
SPENQ96T58 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SPENQ96T58 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPENQ96T58 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SPENQ96T58 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SPENQ96T58 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPENQ96T58 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SPENQ96T58 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.52■□□□□ 0.08
SPENQ96T58 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.52■□□□□ 0.08
SPENQ96T58 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPENQ96T58 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.52■□□□□ 0.08
SPENQ96T58 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.52■□□□□ 0.08
SPENQ96T58 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.52■□□□□ 0.08
SPENQ96T58 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.52■□□□□ 0.08
SPENQ96T58 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.52■□□□□ 0.08
SPENQ96T58 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.52■□□□□ 0.08
SPENQ96T58 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.52■□□□□ 0.08
SPENQ96T58 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPENQ96T58 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms