Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEK1Q96PY6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEK1Q96PY6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NEK1Q96PY6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEK1Q96PY6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NEK1Q96PY6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEK1Q96PY6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEK1Q96PY6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEK1Q96PY6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEK1Q96PY6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEK1Q96PY6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEK1Q96PY6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEK1Q96PY6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NEK1Q96PY6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NEK1Q96PY6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NEK1Q96PY6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NEK1Q96PY6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 AC132008.2-207ENST00000454517 770 ntBASIC20.59■□□□□ 0.89
NEK1Q96PY6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 AC022211.2-201ENST00000585075 2527 ntBASIC20.59■□□□□ 0.89
NEK1Q96PY6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEK1Q96PY6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.59■□□□□ 0.89
NEK1Q96PY6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.58■□□□□ 0.89
NEK1Q96PY6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 AC148477.5-201ENST00000625164 1645 ntBASIC20.58■□□□□ 0.89
NEK1Q96PY6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.58■□□□□ 0.89
NEK1Q96PY6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
NEK1Q96PY6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
NEK1Q96PY6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEK1Q96PY6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
NEK1Q96PY6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NEK1Q96PY6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEK1Q96PY6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NEK1Q96PY6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEK1Q96PY6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEK1Q96PY6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEK1Q96PY6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
NEK1Q96PY6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms