Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 AL023806.1-201ENST00000603994 1649 ntBASIC13.22□□□□□ -0.29
AP1S3Q96PC3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 AL023284.2-201ENST00000405850 579 ntBASIC13.22□□□□□ -0.29
AP1S3Q96PC3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 AC022211.2-201ENST00000585075 2527 ntBASIC13.21□□□□□ -0.29
AP1S3Q96PC3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 AL355802.2-201ENST00000402069 882 ntBASIC13.21□□□□□ -0.29
AP1S3Q96PC3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 AC009065.1-201ENST00000564055 1225 ntBASIC13.21□□□□□ -0.29
AP1S3Q96PC3 CR392000.1-201ENST00000624770 1228 ntBASIC13.21□□□□□ -0.29
AP1S3Q96PC3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
AP1S3Q96PC3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
AP1S3Q96PC3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
AP1S3Q96PC3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
AP1S3Q96PC3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
AP1S3Q96PC3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
AP1S3Q96PC3 UBALD1-205ENST00000590891 2641 ntBASIC13.21□□□□□ -0.3
AP1S3Q96PC3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
AP1S3Q96PC3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
AP1S3Q96PC3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
AP1S3Q96PC3 LINC00554-201ENST00000564841 3011 ntBASIC13.21□□□□□ -0.3
AP1S3Q96PC3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.21□□□□□ -0.3
AP1S3Q96PC3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.3
AP1S3Q96PC3 AC093010.1-201ENST00000473625 1624 ntBASIC13.21□□□□□ -0.3
AP1S3Q96PC3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms