Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
FGD4Q96M96 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.64■□□□□ 0.73
FGD4Q96M96 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
FGD4Q96M96 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FGD4Q96M96 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
FGD4Q96M96 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
FGD4Q96M96 AC046185.3-201ENST00000623228 1824 ntBASIC19.63■□□□□ 0.73
FGD4Q96M96 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
FGD4Q96M96 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
FGD4Q96M96 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
FGD4Q96M96 CXCL1P1-201ENST00000502804 216 ntBASIC19.63■□□□□ 0.73
FGD4Q96M96 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.63■□□□□ 0.73
FGD4Q96M96 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.63■□□□□ 0.73
FGD4Q96M96 AC023141.13-201ENST00000604991 943 ntBASIC19.63■□□□□ 0.73
FGD4Q96M96 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.63■□□□□ 0.73
FGD4Q96M96 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.63■□□□□ 0.73
FGD4Q96M96 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.63■□□□□ 0.73
FGD4Q96M96 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
FGD4Q96M96 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.63■□□□□ 0.73
FGD4Q96M96 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FGD4Q96M96 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FGD4Q96M96 AC138028.4-201ENST00000564984 1845 ntBASIC19.62■□□□□ 0.73
FGD4Q96M96 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
FGD4Q96M96 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.62■□□□□ 0.73
FGD4Q96M96 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
FGD4Q96M96 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FGD4Q96M96 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
FGD4Q96M96 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.62■□□□□ 0.73
FGD4Q96M96 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FGD4Q96M96 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
FGD4Q96M96 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FGD4Q96M96 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
FGD4Q96M96 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.62■□□□□ 0.73
FGD4Q96M96 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FGD4Q96M96 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FGD4Q96M96 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.62■□□□□ 0.73
FGD4Q96M96 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.62■□□□□ 0.73
FGD4Q96M96 FAM185BP-201ENST00000443595 716 ntBASIC19.62■□□□□ 0.73
FGD4Q96M96 SLC25A6P2-201ENST00000497974 877 ntBASIC19.62■□□□□ 0.73
FGD4Q96M96 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.62■□□□□ 0.73
FGD4Q96M96 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.62■□□□□ 0.73
FGD4Q96M96 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.62■□□□□ 0.73
FGD4Q96M96 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.62■□□□□ 0.73
FGD4Q96M96 LINC02084-201ENST00000606069 1096 ntBASIC19.62■□□□□ 0.73
FGD4Q96M96 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
FGD4Q96M96 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.62■□□□□ 0.73
FGD4Q96M96 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FGD4Q96M96 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
FGD4Q96M96 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
FGD4Q96M96 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FGD4Q96M96 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
FGD4Q96M96 AC092919.2-201ENST00000623631 1645 ntBASIC19.62■□□□□ 0.73
FGD4Q96M96 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
FGD4Q96M96 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FGD4Q96M96 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
FGD4Q96M96 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.61■□□□□ 0.73
FGD4Q96M96 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FGD4Q96M96 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
FGD4Q96M96 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FGD4Q96M96 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.61■□□□□ 0.73
FGD4Q96M96 AL139400.1-201ENST00000366220 510 ntBASIC19.61■□□□□ 0.73
FGD4Q96M96 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FGD4Q96M96 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FGD4Q96M96 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.61■□□□□ 0.73
FGD4Q96M96 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.61■□□□□ 0.73
FGD4Q96M96 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
FGD4Q96M96 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.61■□□□□ 0.73
FGD4Q96M96 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.61■□□□□ 0.73
FGD4Q96M96 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.61■□□□□ 0.73
FGD4Q96M96 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FGD4Q96M96 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.61■□□□□ 0.73
FGD4Q96M96 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FGD4Q96M96 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FGD4Q96M96 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FGD4Q96M96 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FGD4Q96M96 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FGD4Q96M96 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FGD4Q96M96 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FGD4Q96M96 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FGD4Q96M96 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FGD4Q96M96 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms