Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 LINC02012-201ENST00000608206 1725 ntBASIC16.61■□□□□ 0.25
ITCHQ96J02 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ITCHQ96J02 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ITCHQ96J02 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ITCHQ96J02 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.61■□□□□ 0.25
ITCHQ96J02 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.61■□□□□ 0.25
ITCHQ96J02 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.61■□□□□ 0.25
ITCHQ96J02 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ITCHQ96J02 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.6■□□□□ 0.25
ITCHQ96J02 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ITCHQ96J02 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
ITCHQ96J02 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 MYCLP1-201ENST00000372451 1075 ntBASIC16.6■□□□□ 0.25
ITCHQ96J02 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 AL359075.1-203ENST00000462729 1002 ntBASIC16.6■□□□□ 0.25
ITCHQ96J02 YBX1P2-201ENST00000489612 999 ntBASIC16.6■□□□□ 0.25
ITCHQ96J02 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 AC139887.4-201ENST00000607877 719 ntBASIC16.6■□□□□ 0.25
ITCHQ96J02 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.6■□□□□ 0.25
ITCHQ96J02 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
ITCHQ96J02 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.6■□□□□ 0.25
ITCHQ96J02 CICP6-201ENST00000457191 2729 ntBASIC16.6■□□□□ 0.25
ITCHQ96J02 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ITCHQ96J02 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
ITCHQ96J02 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ITCHQ96J02 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ITCHQ96J02 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.59■□□□□ 0.25
ITCHQ96J02 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ITCHQ96J02 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ITCHQ96J02 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.59■□□□□ 0.25
ITCHQ96J02 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ITCHQ96J02 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.59■□□□□ 0.25
ITCHQ96J02 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.59■□□□□ 0.25
ITCHQ96J02 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.59■□□□□ 0.25
ITCHQ96J02 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.59■□□□□ 0.25
ITCHQ96J02 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.59■□□□□ 0.25
ITCHQ96J02 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.59■□□□□ 0.25
ITCHQ96J02 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.59■□□□□ 0.25
ITCHQ96J02 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
ITCHQ96J02 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITCHQ96J02 AC093525.9-201ENST00000624961 1746 ntBASIC16.59■□□□□ 0.25
ITCHQ96J02 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.59■□□□□ 0.25
ITCHQ96J02 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.59■□□□□ 0.25
ITCHQ96J02 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ITCHQ96J02 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ITCHQ96J02 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITCHQ96J02 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.58■□□□□ 0.25
ITCHQ96J02 AGGF1P2-201ENST00000426656 2106 ntBASIC16.58■□□□□ 0.25
ITCHQ96J02 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms