Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS33AQ96AX1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
VPS33AQ96AX1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS33AQ96AX1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS33AQ96AX1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VPS33AQ96AX1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
VPS33AQ96AX1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.77■□□□□ 0.27
VPS33AQ96AX1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS33AQ96AX1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS33AQ96AX1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VPS33AQ96AX1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
VPS33AQ96AX1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 PCDH8P1-201ENST00000428983 2773 ntBASIC16.76■□□□□ 0.27
VPS33AQ96AX1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 KRT18P48-201ENST00000434763 852 ntBASIC16.76■□□□□ 0.27
VPS33AQ96AX1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS33AQ96AX1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 AL139327.4-201ENST00000612362 153 ntBASIC16.75■□□□□ 0.27
VPS33AQ96AX1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.75■□□□□ 0.27
VPS33AQ96AX1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 AC092053.1-201ENST00000605787 1936 ntBASIC16.74■□□□□ 0.27
VPS33AQ96AX1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 KRT18P22-201ENST00000402024 1347 ntBASIC16.74■□□□□ 0.27
VPS33AQ96AX1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS33AQ96AX1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms