Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE4Q96A23 AC009336.1-201ENST00000608941 1553 ntBASIC15.66■□□□□ 0.1
CPNE4Q96A23 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.66■□□□□ 0.1
CPNE4Q96A23 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 AL139327.4-201ENST00000612362 153 ntBASIC15.65■□□□□ 0.1
CPNE4Q96A23 AL022326.1-202ENST00000641533 845 ntBASIC15.65■□□□□ 0.1
CPNE4Q96A23 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE4Q96A23 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CPNE4Q96A23 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
CPNE4Q96A23 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE4Q96A23 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE4Q96A23 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE4Q96A23 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE4Q96A23 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE4Q96A23 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE4Q96A23 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE4Q96A23 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE4Q96A23 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE4Q96A23 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE4Q96A23 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE4Q96A23 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE4Q96A23 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 FAM197Y8-203ENST00000450145 560 ntBASIC15.64■□□□□ 0.09
CPNE4Q96A23 PRYP5-201ENST00000451909 266 ntBASIC15.64■□□□□ 0.09
CPNE4Q96A23 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 AP002469.2-201ENST00000531724 424 ntBASIC15.64■□□□□ 0.09
CPNE4Q96A23 AL662844.1-201ENST00000546340 181 ntBASIC15.64■□□□□ 0.09
CPNE4Q96A23 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 AC104692.2-201ENST00000603054 253 ntBASIC15.64■□□□□ 0.09
CPNE4Q96A23 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE4Q96A23 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE4Q96A23 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE4Q96A23 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.64■□□□□ 0.09
CPNE4Q96A23 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE4Q96A23 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE4Q96A23 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE4Q96A23 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms