Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 MIR574-201ENST00000385209 96 ntBASIC20.45■□□□□ 0.86
STAG1Q8WVM7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 RPL13AP23-201ENST00000480739 586 ntBASIC20.45■□□□□ 0.86
STAG1Q8WVM7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 AC141586.5-201ENST00000624546 2050 ntBASIC20.45■□□□□ 0.86
STAG1Q8WVM7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 AL590787.1-201ENST00000568856 1315 ntBASIC20.45■□□□□ 0.86
STAG1Q8WVM7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
STAG1Q8WVM7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 GPR89P-201ENST00000407924 1495 ntBASIC20.44■□□□□ 0.86
STAG1Q8WVM7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 AP002414.3-201ENST00000589352 1468 ntBASIC20.44■□□□□ 0.86
STAG1Q8WVM7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 AC106730.1-201ENST00000566722 1090 ntBASIC20.44■□□□□ 0.86
STAG1Q8WVM7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
STAG1Q8WVM7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
STAG1Q8WVM7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms