Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
TRIM41Q8WV44 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC29.69■■■□□ 2.34
TRIM41Q8WV44 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC29.69■■■□□ 2.34
TRIM41Q8WV44 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC29.69■■■□□ 2.34
TRIM41Q8WV44 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 AC108751.1-201ENST00000490852 363 ntBASIC29.68■■■□□ 2.34
TRIM41Q8WV44 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 IFT20-216ENST00000588477 774 ntTSL 5 BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 AC068587.10-201ENST00000641210 219 ntBASIC29.68■■■□□ 2.34
TRIM41Q8WV44 AL358472.5-202ENST00000641448 1267 ntBASIC29.68■■■□□ 2.34
TRIM41Q8WV44 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC29.68■■■□□ 2.34
TRIM41Q8WV44 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
TRIM41Q8WV44 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
TRIM41Q8WV44 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
TRIM41Q8WV44 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
TRIM41Q8WV44 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
TRIM41Q8WV44 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC29.67■■■□□ 2.34
TRIM41Q8WV44 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
TRIM41Q8WV44 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC29.67■■■□□ 2.34
TRIM41Q8WV44 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC29.67■■■□□ 2.34
TRIM41Q8WV44 AC008761.3-201ENST00000624803 892 ntBASIC29.67■■■□□ 2.34
TRIM41Q8WV44 LINC00628-201ENST00000628516 1289 ntBASIC29.67■■■□□ 2.34
TRIM41Q8WV44 AC012317.2-201ENST00000623305 2251 ntBASIC29.67■■■□□ 2.34
TRIM41Q8WV44 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
TRIM41Q8WV44 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
TRIM41Q8WV44 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
TRIM41Q8WV44 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
TRIM41Q8WV44 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC29.67■■■□□ 2.34
TRIM41Q8WV44 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
TRIM41Q8WV44 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 COX5A-202ENST00000562233 441 ntTSL 3 BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 RNF151-202ENST00000569210 853 ntTSL 2 BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 STK25P1-201ENST00000585406 838 ntBASIC29.66■■■□□ 2.34
TRIM41Q8WV44 AL022326.1-202ENST00000641533 845 ntBASIC29.66■■■□□ 2.34
TRIM41Q8WV44 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
TRIM41Q8WV44 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 AC006116.8-202ENST00000587620 1550 ntBASIC29.65■■■□□ 2.34
TRIM41Q8WV44 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 CYGB-205ENST00000590175 830 ntTSL 3 BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 AC004835.2-201ENST00000603762 682 ntBASIC29.65■■■□□ 2.34
TRIM41Q8WV44 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TRIM41Q8WV44 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC29.65■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms