Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 AL023973.1-201ENST00000624619 620 ntBASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 AC026691.1-201ENST00000602502 2017 ntBASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
RPS4Y2Q8TD47 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 EGFEM1P-202ENST00000431685 1563 ntBASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 STARP1-201ENST00000397973 869 ntBASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 TMPOP1-202ENST00000424642 1267 ntBASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 AC006449.5-201ENST00000610658 2098 ntBASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RPS4Y2Q8TD47 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 CYP2T1P-202ENST00000641596 2535 ntBASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 TERF1P1-201ENST00000311003 1181 ntBASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 RCN1P1-201ENST00000400413 996 ntBASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 GPR32P1-201ENST00000601788 811 ntBASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS4Y2Q8TD47 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms