Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 AC007967.3-201ENST00000434308 558 ntBASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 SART3-203ENST00000546611 1184 ntBASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 AL049840.3-201ENST00000602669 611 ntBASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 AF228730.7-201ENST00000641842 219 ntBASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 AC243591.1-201ENST00000452967 1364 ntBASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDND2Q8NHS1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CLDND2Q8NHS1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.83□□□□□ -0.03
CLDND2Q8NHS1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.83□□□□□ -0.03
CLDND2Q8NHS1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLDND2Q8NHS1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 HNRNPDP1-201ENST00000439535 754 ntBASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 SLC25A1P1-201ENST00000528351 927 ntBASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 FAM215A-202ENST00000632077 792 ntBASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 AL356309.3-201ENST00000624132 1934 ntBASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 AC097374.2-201ENST00000618617 1306 ntBASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDND2Q8NHS1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 RPS2P28-201ENST00000314255 741 ntBASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 AC021087.4-201ENST00000563761 564 ntBASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 AC139887.3-201ENST00000568585 713 ntBASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 AC023511.2-201ENST00000618803 211 ntBASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDND2Q8NHS1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms