Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTL9Q8NET4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTL9Q8NET4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.32■■□□□ 1
RTL9Q8NET4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.31■■□□□ 1
RTL9Q8NET4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.31■■□□□ 1
RTL9Q8NET4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.31■■□□□ 1
RTL9Q8NET4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.31■■□□□ 1
RTL9Q8NET4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
RTL9Q8NET4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.31■■□□□ 1
RTL9Q8NET4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.31■■□□□ 1
RTL9Q8NET4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RTL9Q8NET4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RTL9Q8NET4 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.31■■□□□ 1
RTL9Q8NET4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.31■■□□□ 1
RTL9Q8NET4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL9Q8NET4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.31■■□□□ 1
RTL9Q8NET4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.31■■□□□ 1
RTL9Q8NET4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RTL9Q8NET4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.3■■□□□ 1
RTL9Q8NET4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTL9Q8NET4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RTL9Q8NET4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RTL9Q8NET4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTL9Q8NET4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.3■■□□□ 1
RTL9Q8NET4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.3■■□□□ 1
RTL9Q8NET4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.3■■□□□ 1
RTL9Q8NET4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTL9Q8NET4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RTL9Q8NET4 ACTG1P14-201ENST00000446382 1122 ntBASIC21.3■■□□□ 1
RTL9Q8NET4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
RTL9Q8NET4 AP002472.1-201ENST00000577490 586 ntBASIC21.3■■□□□ 1
RTL9Q8NET4 AC068137.2-201ENST00000605408 478 ntBASIC21.3■■□□□ 1
RTL9Q8NET4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.3■■□□□ 1
RTL9Q8NET4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTL9Q8NET4 AC129492.6-201ENST00000611383 1305 ntBASIC21.3■■□□□ 1
RTL9Q8NET4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RTL9Q8NET4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTL9Q8NET4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.3■■□□□ 1
RTL9Q8NET4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTL9Q8NET4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTL9Q8NET4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
RTL9Q8NET4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.3■■□□□ 1
RTL9Q8NET4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
RTL9Q8NET4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
RTL9Q8NET4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RTL9Q8NET4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTL9Q8NET4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTL9Q8NET4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTL9Q8NET4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTL9Q8NET4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RTL9Q8NET4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTL9Q8NET4 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.29■■□□□ 1
RTL9Q8NET4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
RTL9Q8NET4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTL9Q8NET4 CEND1P1-201ENST00000451006 455 ntBASIC21.29■■□□□ 1
RTL9Q8NET4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.29■■□□□ 1
RTL9Q8NET4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.29■■□□□ 1
RTL9Q8NET4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.29■■□□□ 1
RTL9Q8NET4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.29■■□□□ 1
RTL9Q8NET4 AC091812.2-201ENST00000619081 385 ntBASIC21.29■■□□□ 1
RTL9Q8NET4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTL9Q8NET4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTL9Q8NET4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.29■■□□□ 1
RTL9Q8NET4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RTL9Q8NET4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTL9Q8NET4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.29■■□□□ 1
RTL9Q8NET4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RTL9Q8NET4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RTL9Q8NET4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.29■■□□□ 1
RTL9Q8NET4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTL9Q8NET4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RTL9Q8NET4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RTL9Q8NET4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTL9Q8NET4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTL9Q8NET4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTL9Q8NET4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTL9Q8NET4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.28■■□□□ 1
RTL9Q8NET4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RTL9Q8NET4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTL9Q8NET4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTL9Q8NET4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.28■■□□□ 1
RTL9Q8NET4 AL645939.2-201ENST00000427340 991 ntBASIC21.28■■□□□ 1
RTL9Q8NET4 FAM58CP-201ENST00000435741 640 ntBASIC21.28■■□□□ 1
RTL9Q8NET4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RTL9Q8NET4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms