Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 AP000867.4-201ENST00000641616 219 ntBASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 AC009336.1-201ENST00000608941 1553 ntBASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 AC091304.2-201ENST00000564639 760 ntBASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SRFBP1Q8NEF9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 AL020989.1-201ENST00000422979 469 ntBASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 KRT18P31-201ENST00000506277 1292 ntBASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 AC132938.5-201ENST00000624980 1813 ntBASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRFBP1Q8NEF9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 AC139713.2-201ENST00000641328 2723 ntBASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms