Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.97■□□□□ 0.31
HIPK4Q8NE63 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HIPK4Q8NE63 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HIPK4Q8NE63 PCDHB17P-201ENST00000539533 2393 ntBASIC16.97■□□□□ 0.31
HIPK4Q8NE63 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIPK4Q8NE63 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIPK4Q8NE63 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HIPK4Q8NE63 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIPK4Q8NE63 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIPK4Q8NE63 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIPK4Q8NE63 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIPK4Q8NE63 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIPK4Q8NE63 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HIPK4Q8NE63 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.97■□□□□ 0.31
HIPK4Q8NE63 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 BX088651.1-201ENST00000540551 451 ntBASIC16.96■□□□□ 0.31
HIPK4Q8NE63 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 AC112497.1-201ENST00000624824 639 ntBASIC16.96■□□□□ 0.31
HIPK4Q8NE63 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIPK4Q8NE63 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.96■□□□□ 0.3
HIPK4Q8NE63 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.96■□□□□ 0.3
HIPK4Q8NE63 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HIPK4Q8NE63 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.96■□□□□ 0.3
HIPK4Q8NE63 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HIPK4Q8NE63 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.96■□□□□ 0.3
HIPK4Q8NE63 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.96■□□□□ 0.3
HIPK4Q8NE63 AC092338.2-201ENST00000568827 1415 ntBASIC16.96■□□□□ 0.3
HIPK4Q8NE63 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.96■□□□□ 0.3
HIPK4Q8NE63 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 AC063926.3-201ENST00000624734 5658 ntBASIC16.95■□□□□ 0.3
HIPK4Q8NE63 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 AL024508.2-201ENST00000607749 1894 ntBASIC16.95■□□□□ 0.3
HIPK4Q8NE63 AC132938.6-201ENST00000623828 1655 ntBASIC16.95■□□□□ 0.3
HIPK4Q8NE63 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 RBM17P1-201ENST00000453646 1190 ntBASIC16.95■□□□□ 0.3
HIPK4Q8NE63 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.95■□□□□ 0.3
HIPK4Q8NE63 FLJ16779-201ENST00000612722 7638 ntBASIC16.95■□□□□ 0.3
HIPK4Q8NE63 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 AL662844.4-201ENST00000606367 2838 ntBASIC16.94■□□□□ 0.3
HIPK4Q8NE63 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms