Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 AC012615.1-201ENST00000565797 1299 ntBASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 AC012313.10-201ENST00000623509 926 ntBASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 CROCCP2-202ENST00000412962 2773 ntBASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 AD000864.1-201ENST00000624076 2295 ntBASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 AC080080.1-201ENST00000625121 2420 ntBASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 AC026396.1-201ENST00000419388 421 ntBASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 AC005104.2-201ENST00000427818 678 ntBASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 AC011467.2-201ENST00000598425 242 ntBASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 AC138894.3-201ENST00000603787 634 ntBASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 LINC01451-201ENST00000623792 534 ntBASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 LYSMD4-203ENST00000378904 2122 ntBASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 AL049757.1-201ENST00000616842 1596 ntBASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIMC1Q8NDZ2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 FOSL1P1-201ENST00000511041 816 ntBASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 AC009533.2-201ENST00000543664 586 ntBASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 AC109462.3-201ENST00000573934 613 ntBASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 INTS4P1-201ENST00000438455 1935 ntBASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms