Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
CFAP43Q8NDM7 WRB-204ENST00000398753 699 ntTSL 3 BASIC26.95■■□□□ 1.91
CFAP43Q8NDM7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC26.95■■□□□ 1.91
CFAP43Q8NDM7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC26.95■■□□□ 1.91
CFAP43Q8NDM7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC26.95■■□□□ 1.91
CFAP43Q8NDM7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC26.95■■□□□ 1.91
CFAP43Q8NDM7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 AP005018.1-201ENST00000525475 301 ntBASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC26.95■■□□□ 1.9
CFAP43Q8NDM7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 ACTL9-202ENST00000612068 1252 ntBASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
CFAP43Q8NDM7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 BASP1P1-201ENST00000430708 665 ntBASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 SLC25A6P2-201ENST00000497974 877 ntBASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 AC133963.1-201ENST00000504166 1679 ntBASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFAP43Q8NDM7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 AL512356.2-201ENST00000546955 174 ntBASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 AC140878.1-201ENST00000565277 250 ntBASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 AL355312.1-201ENST00000407115 2176 ntBASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 NOC2LP1-202ENST00000452600 2235 ntBASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 LINC02560-201ENST00000596379 459 ntBASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC26.92■■□□□ 1.9
CFAP43Q8NDM7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
CFAP43Q8NDM7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC26.91■■□□□ 1.9
CFAP43Q8NDM7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC26.91■■□□□ 1.9
CFAP43Q8NDM7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC26.91■■□□□ 1.9
CFAP43Q8NDM7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CFAP43Q8NDM7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC26.91■■□□□ 1.9
CFAP43Q8NDM7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CFAP43Q8NDM7 HNRNPFP1-201ENST00000391730 1133 ntBASIC26.91■■□□□ 1.9
CFAP43Q8NDM7 INGX-202ENST00000489074 768 ntBASIC26.91■■□□□ 1.9
CFAP43Q8NDM7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
CFAP43Q8NDM7 GATB-205ENST00000508611 605 ntTSL 2 BASIC26.91■■□□□ 1.9
CFAP43Q8NDM7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CFAP43Q8NDM7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms