Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 MIR4453-201ENST00000584019 89 ntBASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 DFFBP1-201ENST00000433250 979 ntBASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC168Q8NDH2 AC009949.1-201ENST00000623048 1830 ntBASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 AP006294.1-201ENST00000415407 339 ntBASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 MIR6787-201ENST00000616675 61 ntBASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC168Q8NDH2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 AC241585.1-201ENST00000433527 519 ntBASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 AC073592.8-201ENST00000624126 511 ntBASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CCDC168Q8NDH2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms