Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 TP73-AS1-210ENST00000637775 1455 ntBASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 PRORSD1P-202ENST00000563365 2154 ntBASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 POM121L3P-201ENST00000419331 1163 ntBASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 AC108860.2-201ENST00000562760 2183 ntBASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 AL353593.2-201ENST00000602529 1483 ntBASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 NSUN5P1-202ENST00000421140 1535 ntBASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 NSUN5P2-203ENST00000457352 1529 ntBASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.79□□□□□ -0.2
TTC9CQ8N5M4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 AC012313.1-201ENST00000593393 3059 ntBASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 AC104819.1-201ENST00000504587 486 ntBASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 AC074051.2-201ENST00000565115 352 ntBASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 AC012615.1-201ENST00000565797 1299 ntBASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 AC092329.2-201ENST00000598402 547 ntBASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 KRT8P10-201ENST00000450021 1447 ntBASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TTC9CQ8N5M4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.77□□□□□ -0.2
TTC9CQ8N5M4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TTC9CQ8N5M4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms