Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SIX5Q8N196 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX5Q8N196 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SIX5Q8N196 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX5Q8N196 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX5Q8N196 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.78■□□□□ 0.44
SIX5Q8N196 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX5Q8N196 AC236430.1-201ENST00000402231 743 ntBASIC17.78■□□□□ 0.44
SIX5Q8N196 AL627223.1-201ENST00000416693 442 ntBASIC17.78■□□□□ 0.44
SIX5Q8N196 LINC00982-205ENST00000420957 435 ntBASIC17.78■□□□□ 0.44
SIX5Q8N196 TERF1P3-201ENST00000505638 1227 ntBASIC17.78■□□□□ 0.44
SIX5Q8N196 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.78■□□□□ 0.44
SIX5Q8N196 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SIX5Q8N196 AC087641.1-201ENST00000557561 1021 ntBASIC17.78■□□□□ 0.44
SIX5Q8N196 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.78■□□□□ 0.44
SIX5Q8N196 AC015911.4-201ENST00000588022 1070 ntBASIC17.78■□□□□ 0.44
SIX5Q8N196 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX5Q8N196 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SIX5Q8N196 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.78■□□□□ 0.44
SIX5Q8N196 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.78■□□□□ 0.44
SIX5Q8N196 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX5Q8N196 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SIX5Q8N196 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SIX5Q8N196 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SIX5Q8N196 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.78■□□□□ 0.44
SIX5Q8N196 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SIX5Q8N196 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SIX5Q8N196 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX5Q8N196 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIX5Q8N196 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIX5Q8N196 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SIX5Q8N196 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SIX5Q8N196 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SIX5Q8N196 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIX5Q8N196 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SIX5Q8N196 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIX5Q8N196 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIX5Q8N196 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIX5Q8N196 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIX5Q8N196 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.77■□□□□ 0.44
SIX5Q8N196 BASP1P1-201ENST00000430708 665 ntBASIC17.77■□□□□ 0.44
SIX5Q8N196 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.77■□□□□ 0.44
SIX5Q8N196 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SIX5Q8N196 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.77■□□□□ 0.44
SIX5Q8N196 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
SIX5Q8N196 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.77■□□□□ 0.44
SIX5Q8N196 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.77■□□□□ 0.44
SIX5Q8N196 AC005225.4-201ENST00000557330 545 ntBASIC17.77■□□□□ 0.44
SIX5Q8N196 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.77■□□□□ 0.44
SIX5Q8N196 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.77■□□□□ 0.44
SIX5Q8N196 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.77■□□□□ 0.44
SIX5Q8N196 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.77■□□□□ 0.44
SIX5Q8N196 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
SIX5Q8N196 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SIX5Q8N196 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIX5Q8N196 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
SIX5Q8N196 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIX5Q8N196 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIX5Q8N196 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SIX5Q8N196 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIX5Q8N196 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.77■□□□□ 0.43
SIX5Q8N196 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.77■□□□□ 0.43
SIX5Q8N196 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIX5Q8N196 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
SIX5Q8N196 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX5Q8N196 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX5Q8N196 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
SIX5Q8N196 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIX5Q8N196 AC093010.1-201ENST00000473625 1624 ntBASIC17.76■□□□□ 0.43
SIX5Q8N196 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX5Q8N196 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX5Q8N196 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX5Q8N196 AC020763.4-201ENST00000623414 4170 ntBASIC17.76■□□□□ 0.43
SIX5Q8N196 ANO7L1-203ENST00000602586 1720 ntBASIC17.76■□□□□ 0.43
SIX5Q8N196 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX5Q8N196 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX5Q8N196 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX5Q8N196 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX5Q8N196 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX5Q8N196 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SIX5Q8N196 CNN2P2-201ENST00000443536 909 ntBASIC17.76■□□□□ 0.43
SIX5Q8N196 CNN2P3-201ENST00000450201 906 ntBASIC17.76■□□□□ 0.43
SIX5Q8N196 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIX5Q8N196 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.76■□□□□ 0.43
SIX5Q8N196 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX5Q8N196 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX5Q8N196 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.76■□□□□ 0.43
SIX5Q8N196 STK25P1-201ENST00000585406 838 ntBASIC17.76■□□□□ 0.43
SIX5Q8N196 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIX5Q8N196 AL136317.3-201ENST00000618497 906 ntBASIC17.76■□□□□ 0.43
SIX5Q8N196 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.76■□□□□ 0.43
SIX5Q8N196 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX5Q8N196 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX5Q8N196 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SIX5Q8N196 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX5Q8N196 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.76■□□□□ 0.43
SIX5Q8N196 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SIX5Q8N196 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX5Q8N196 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.75■□□□□ 0.43
SIX5Q8N196 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms