Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13CQ709C8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
VPS13CQ709C8 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.37□□□□□ -0.11
VPS13CQ709C8 AL592309.1-201ENST00000443127 649 ntBASIC14.37□□□□□ -0.11
VPS13CQ709C8 AL138828.2-201ENST00000615812 383 ntBASIC14.37□□□□□ -0.11
VPS13CQ709C8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13CQ709C8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13CQ709C8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13CQ709C8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13CQ709C8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.37□□□□□ -0.11
VPS13CQ709C8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VPS13CQ709C8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
VPS13CQ709C8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
VPS13CQ709C8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.36□□□□□ -0.11
VPS13CQ709C8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 AC103564.2-201ENST00000432853 1299 ntBASIC14.36□□□□□ -0.11
VPS13CQ709C8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
VPS13CQ709C8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.36□□□□□ -0.11
VPS13CQ709C8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.36□□□□□ -0.11
VPS13CQ709C8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.36□□□□□ -0.11
VPS13CQ709C8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.36□□□□□ -0.11
VPS13CQ709C8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.36□□□□□ -0.11
VPS13CQ709C8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.36□□□□□ -0.11
VPS13CQ709C8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.36□□□□□ -0.11
VPS13CQ709C8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS13CQ709C8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS13CQ709C8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 CXCL1P1-201ENST00000502804 216 ntBASIC14.35□□□□□ -0.11
VPS13CQ709C8 AC027307.3-201ENST00000594262 1100 ntBASIC14.35□□□□□ -0.11
VPS13CQ709C8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
VPS13CQ709C8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS13CQ709C8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS13CQ709C8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 AC112191.1-201ENST00000523689 701 ntBASIC14.35□□□□□ -0.11
VPS13CQ709C8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.35□□□□□ -0.11
VPS13CQ709C8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.35□□□□□ -0.11
VPS13CQ709C8 AC009113.1-201ENST00000570267 2443 ntBASIC14.35□□□□□ -0.11
VPS13CQ709C8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VPS13CQ709C8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 RN7SL589P-201ENST00000481268 310 ntBASIC14.35□□□□□ -0.11
VPS13CQ709C8 AL359881.2-201ENST00000602973 570 ntBASIC14.35□□□□□ -0.11
VPS13CQ709C8 AC007064.4-201ENST00000637740 555 ntBASIC14.35□□□□□ -0.11
VPS13CQ709C8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS13CQ709C8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13CQ709C8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13CQ709C8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VPS13CQ709C8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13CQ709C8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VPS13CQ709C8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13CQ709C8 GGTLC5P-201ENST00000617623 998 ntBASIC14.34□□□□□ -0.11
VPS13CQ709C8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.34□□□□□ -0.11
VPS13CQ709C8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13CQ709C8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13CQ709C8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.34□□□□□ -0.11
VPS13CQ709C8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13CQ709C8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS13CQ709C8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.34□□□□□ -0.11
VPS13CQ709C8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS13CQ709C8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VPS13CQ709C8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13CQ709C8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13CQ709C8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13CQ709C8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VPS13CQ709C8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VPS13CQ709C8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13CQ709C8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13CQ709C8 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms