Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 AC073592.4-201ENST00000623827 446 ntBASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DENND1BQ6P3S1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 RBM17P3-201ENST00000417687 1192 ntBASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 FGFR3P6-201ENST00000457012 610 ntBASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 AF238378.1-201ENST00000526806 358 ntBASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 AC008608.2-201ENST00000606089 416 ntBASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 AL355877.3-201ENST00000622820 899 ntBASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 LTB4R2-202ENST00000528054 3092 ntBASIC18.41■□□□□ 0.54
DENND1BQ6P3S1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 SIGLEC16-201ENST00000599858 1437 ntBASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 SIGLEC30P-201ENST00000455569 941 ntBASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 NKAPP1-205ENST00000585790 367 ntBASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND1BQ6P3S1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
DENND1BQ6P3S1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
DENND1BQ6P3S1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
DENND1BQ6P3S1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
DENND1BQ6P3S1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.39■□□□□ 0.54
DENND1BQ6P3S1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DENND1BQ6P3S1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DENND1BQ6P3S1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DENND1BQ6P3S1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DENND1BQ6P3S1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
DENND1BQ6P3S1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
DENND1BQ6P3S1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.39■□□□□ 0.53
DENND1BQ6P3S1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.39■□□□□ 0.53
DENND1BQ6P3S1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DENND1BQ6P3S1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DENND1BQ6P3S1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DENND1BQ6P3S1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
DENND1BQ6P3S1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.39■□□□□ 0.53
DENND1BQ6P3S1 SAPCD2P3-201ENST00000455031 850 ntBASIC18.39■□□□□ 0.53
DENND1BQ6P3S1 EMBP1-201ENST00000458200 901 ntBASIC18.39■□□□□ 0.53
DENND1BQ6P3S1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms