Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 SIGLEC30P-201ENST00000455569 941 ntBASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 AL121912.1-201ENST00000603683 238 ntBASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP4R3AQ6IN85 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 SART3-203ENST00000546611 1184 ntBASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
PPP4R3AQ6IN85 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 AC016396.2-201ENST00000562575 1417 ntBASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 SCARNA2-201ENST00000458748 420 ntBASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 AC104692.2-201ENST00000603054 253 ntBASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPP4R3AQ6IN85 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
PPP4R3AQ6IN85 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PPP4R3AQ6IN85 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.75
PPP4R3AQ6IN85 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PPP4R3AQ6IN85 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PPP4R3AQ6IN85 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.77■□□□□ 0.75
PPP4R3AQ6IN85 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PPP4R3AQ6IN85 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 TPM4P1-201ENST00000436100 807 ntBASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.76■□□□□ 0.75
PPP4R3AQ6IN85 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms