Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDLRAP1Q5SW96 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 AKR1C7P-201ENST00000305623 895 ntBASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 KLF4P1-201ENST00000412782 1185 ntBASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 RN7SL510P-201ENST00000581311 263 ntBASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 AC008608.2-201ENST00000606089 416 ntBASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 AL139327.4-201ENST00000612362 153 ntBASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 AL355877.3-201ENST00000622820 899 ntBASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDLRAP1Q5SW96 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 FAAHP1-202ENST00000446499 1238 ntBASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 STK19B-204ENST00000512515 211 ntBASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 MTDHP3-201ENST00000594186 672 ntBASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 AC084018.2-201ENST00000613093 2607 ntBASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 AC132938.5-201ENST00000624980 1813 ntBASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
LDLRAP1Q5SW96 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LDLRAP1Q5SW96 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
LDLRAP1Q5SW96 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LDLRAP1Q5SW96 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.33■□□□□ 0.37
LDLRAP1Q5SW96 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.33■□□□□ 0.37
LDLRAP1Q5SW96 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LDLRAP1Q5SW96 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LDLRAP1Q5SW96 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LDLRAP1Q5SW96 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LDLRAP1Q5SW96 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LDLRAP1Q5SW96 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDLRAP1Q5SW96 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LDLRAP1Q5SW96 AL020989.1-201ENST00000422979 469 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms