Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FREM1Q5H8C1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FREM1Q5H8C1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
FREM1Q5H8C1 GPR89P-201ENST00000407924 1495 ntBASIC15.27■□□□□ 0.03
FREM1Q5H8C1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.27■□□□□ 0.03
FREM1Q5H8C1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FREM1Q5H8C1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
FREM1Q5H8C1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 AL139424.1-201ENST00000607572 797 ntBASIC15.26■□□□□ 0.03
FREM1Q5H8C1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 AC026471.1-201ENST00000564629 3026 ntBASIC15.26■□□□□ 0.03
FREM1Q5H8C1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FREM1Q5H8C1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 AC106730.1-201ENST00000566722 1090 ntBASIC15.25■□□□□ 0.03
FREM1Q5H8C1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 Z83851.2-201ENST00000609564 659 ntBASIC15.25■□□□□ 0.03
FREM1Q5H8C1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 HCG4B-203ENST00000450128 991 ntBASIC15.25■□□□□ 0.03
FREM1Q5H8C1 AC087163.2-201ENST00000457299 853 ntBASIC15.25■□□□□ 0.03
FREM1Q5H8C1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 TERC-201ENST00000602385 541 ntBASIC15.25■□□□□ 0.03
FREM1Q5H8C1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
FREM1Q5H8C1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 PMS2P1-201ENST00000431037 1228 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms