Protein–RNA interactions for Protein: Q4G0W2

DUSP28, Dual specificity phosphatase 28, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28Q4G0W2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 AC099522.2-201ENST00000607001 744 ntBASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
DUSP28Q4G0W2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 AL355306.1-201ENST00000415580 579 ntBASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 AC025678.2-201ENST00000562061 970 ntBASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 AC026120.1-201ENST00000611536 926 ntBASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DUSP28Q4G0W2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 FAM8A3P-201ENST00000427218 844 ntBASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 AL671277.1-201ENST00000429656 993 ntBASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 AC109322.1-201ENST00000524499 1264 ntBASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 FAM86C2P-203ENST00000528684 1004 ntBASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.2■□□□□ 0.66
DUSP28Q4G0W2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.19■□□□□ 0.66
DUSP28Q4G0W2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DUSP28Q4G0W2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DUSP28Q4G0W2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DUSP28Q4G0W2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DUSP28Q4G0W2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.19■□□□□ 0.66
DUSP28Q4G0W2 TIMM8BP1-201ENST00000452384 211 ntBASIC19.19■□□□□ 0.66
DUSP28Q4G0W2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.19■□□□□ 0.66
DUSP28Q4G0W2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
DUSP28Q4G0W2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.19■□□□□ 0.66
DUSP28Q4G0W2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.19■□□□□ 0.66
DUSP28Q4G0W2 AC093520.2-201ENST00000561830 333 ntBASIC19.19■□□□□ 0.66
DUSP28Q4G0W2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.19■□□□□ 0.66
DUSP28Q4G0W2 MIR4515-201ENST00000584082 81 ntBASIC19.19■□□□□ 0.66
DUSP28Q4G0W2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms