Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 COX5BP2-201ENST00000392354 334 ntBASIC19.81■□□□□ 0.76
LONRF3Q496Y0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 IGHV3-47-201ENST00000425060 335 ntBASIC19.81■□□□□ 0.76
LONRF3Q496Y0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 AC011840.4-201ENST00000578471 627 ntBASIC19.81■□□□□ 0.76
LONRF3Q496Y0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.81■□□□□ 0.76
LONRF3Q496Y0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LONRF3Q496Y0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 AC016396.2-201ENST00000562575 1417 ntBASIC19.8■□□□□ 0.76
LONRF3Q496Y0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 MINOS1P3-201ENST00000457048 203 ntBASIC19.8■□□□□ 0.76
LONRF3Q496Y0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 AL139327.4-201ENST00000612362 153 ntBASIC19.8■□□□□ 0.76
LONRF3Q496Y0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.8■□□□□ 0.76
LONRF3Q496Y0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 KRT8P10-201ENST00000450021 1447 ntBASIC19.79■□□□□ 0.76
LONRF3Q496Y0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 FDX1P1-201ENST00000449115 551 ntBASIC19.79■□□□□ 0.76
LONRF3Q496Y0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 LINC01711-201ENST00000598340 967 ntBASIC19.79■□□□□ 0.76
LONRF3Q496Y0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 AL121761.2-201ENST00000598007 1648 ntBASIC19.79■□□□□ 0.76
LONRF3Q496Y0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LONRF3Q496Y0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 AC116353.5-201ENST00000638148 1699 ntBASIC19.78■□□□□ 0.76
LONRF3Q496Y0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LONRF3Q496Y0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms