Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 OR6D1P-203ENST00000641209 4860 ntBASIC16.8■□□□□ 0.28
HMGCS1Q01581 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 AC046185.3-201ENST00000623228 1824 ntBASIC16.8■□□□□ 0.28
HMGCS1Q01581 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 IGHV3-52-201ENST00000519770 353 ntBASIC16.79■□□□□ 0.28
HMGCS1Q01581 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGCS1Q01581 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCS1Q01581 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HMGCS1Q01581 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
HMGCS1Q01581 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.78■□□□□ 0.28
HMGCS1Q01581 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 SLC25A1P3-201ENST00000395415 828 ntBASIC16.78■□□□□ 0.28
HMGCS1Q01581 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGCS1Q01581 AC091607.1-201ENST00000490318 1060 ntBASIC16.78■□□□□ 0.28
HMGCS1Q01581 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGCS1Q01581 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGCS1Q01581 AL121956.5-201ENST00000625261 221 ntBASIC16.78■□□□□ 0.28
HMGCS1Q01581 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HMGCS1Q01581 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HMGCS1Q01581 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HMGCS1Q01581 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCS1Q01581 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCS1Q01581 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCS1Q01581 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCS1Q01581 AL049757.1-201ENST00000616842 1596 ntBASIC16.77■□□□□ 0.28
HMGCS1Q01581 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCS1Q01581 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCS1Q01581 AC005332.1-201ENST00000577698 1310 ntBASIC16.77■□□□□ 0.28
HMGCS1Q01581 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCS1Q01581 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCS1Q01581 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCS1Q01581 AC093525.9-201ENST00000624961 1746 ntBASIC16.77■□□□□ 0.28
HMGCS1Q01581 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.77■□□□□ 0.28
HMGCS1Q01581 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCS1Q01581 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCS1Q01581 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms