Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
VLDLRP98155 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VLDLRP98155 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VLDLRP98155 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
VLDLRP98155 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.29■□□□□ 0.2
VLDLRP98155 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.29■□□□□ 0.2
VLDLRP98155 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VLDLRP98155 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.29■□□□□ 0.2
VLDLRP98155 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VLDLRP98155 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VLDLRP98155 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
VLDLRP98155 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
VLDLRP98155 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
VLDLRP98155 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.29■□□□□ 0.2
VLDLRP98155 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.29■□□□□ 0.2
VLDLRP98155 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.29■□□□□ 0.2
VLDLRP98155 LINC01238-205ENST00000567549 1107 ntBASIC16.29■□□□□ 0.2
VLDLRP98155 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.29■□□□□ 0.2
VLDLRP98155 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.29■□□□□ 0.2
VLDLRP98155 AC004263.2-201ENST00000617183 678 ntBASIC16.29■□□□□ 0.2
VLDLRP98155 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.29■□□□□ 0.2
VLDLRP98155 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.29■□□□□ 0.2
VLDLRP98155 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VLDLRP98155 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.29■□□□□ 0.2
VLDLRP98155 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
VLDLRP98155 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VLDLRP98155 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.29■□□□□ 0.2
VLDLRP98155 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VLDLRP98155 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VLDLRP98155 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VLDLRP98155 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.29■□□□□ 0.2
VLDLRP98155 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VLDLRP98155 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VLDLRP98155 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VLDLRP98155 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.28■□□□□ 0.2
VLDLRP98155 LINC02012-201ENST00000608206 1725 ntBASIC16.28■□□□□ 0.2
VLDLRP98155 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.28■□□□□ 0.2
VLDLRP98155 NFIC-211ENST00000641145 8399 ntBASIC16.28■□□□□ 0.2
VLDLRP98155 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 SLC25A1P3-201ENST00000395415 828 ntBASIC16.28■□□□□ 0.2
VLDLRP98155 AP000523.1-201ENST00000398242 1049 ntBASIC16.28■□□□□ 0.2
VLDLRP98155 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 BX664615.1-201ENST00000443558 458 ntBASIC16.28■□□□□ 0.2
VLDLRP98155 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.28■□□□□ 0.2
VLDLRP98155 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.28■□□□□ 0.2
VLDLRP98155 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.28■□□□□ 0.2
VLDLRP98155 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.28■□□□□ 0.2
VLDLRP98155 GCSHP2-201ENST00000560971 527 ntBASIC16.28■□□□□ 0.2
VLDLRP98155 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.28■□□□□ 0.2
VLDLRP98155 AL139327.4-201ENST00000612362 153 ntBASIC16.28■□□□□ 0.2
VLDLRP98155 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.28■□□□□ 0.2
VLDLRP98155 AC079602.3-201ENST00000623931 403 ntBASIC16.28■□□□□ 0.2
VLDLRP98155 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VLDLRP98155 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.28■□□□□ 0.2
VLDLRP98155 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.28■□□□□ 0.2
VLDLRP98155 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.28■□□□□ 0.2
VLDLRP98155 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VLDLRP98155 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VLDLRP98155 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
VLDLRP98155 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VLDLRP98155 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VLDLRP98155 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VLDLRP98155 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VLDLRP98155 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VLDLRP98155 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VLDLRP98155 AC092053.1-201ENST00000605787 1936 ntBASIC16.27■□□□□ 0.2
VLDLRP98155 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
VLDLRP98155 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
VLDLRP98155 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VLDLRP98155 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
VLDLRP98155 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.27■□□□□ 0.2
VLDLRP98155 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VLDLRP98155 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VLDLRP98155 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VLDLRP98155 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VLDLRP98155 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VLDLRP98155 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VLDLRP98155 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VLDLRP98155 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VLDLRP98155 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VLDLRP98155 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.27■□□□□ 0.2
VLDLRP98155 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.27■□□□□ 0.2
VLDLRP98155 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.27■□□□□ 0.2
VLDLRP98155 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VLDLRP98155 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms