Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.14■□□□□ 0.5
IRX4P78413 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.14■□□□□ 0.49
IRX4P78413 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
IRX4P78413 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
IRX4P78413 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.14■□□□□ 0.49
IRX4P78413 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
IRX4P78413 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.14■□□□□ 0.49
IRX4P78413 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.14■□□□□ 0.49
IRX4P78413 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.14■□□□□ 0.49
IRX4P78413 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.14■□□□□ 0.49
IRX4P78413 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.14■□□□□ 0.49
IRX4P78413 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.14■□□□□ 0.49
IRX4P78413 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
IRX4P78413 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
IRX4P78413 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.14■□□□□ 0.49
IRX4P78413 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.14■□□□□ 0.49
IRX4P78413 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
IRX4P78413 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.14■□□□□ 0.49
IRX4P78413 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 AL645608.8-201ENST00000606034 2086 ntBASIC18.14■□□□□ 0.49
IRX4P78413 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.14■□□□□ 0.49
IRX4P78413 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
IRX4P78413 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
IRX4P78413 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.14■□□□□ 0.49
IRX4P78413 NFIC-211ENST00000641145 8399 ntBASIC18.14■□□□□ 0.49
IRX4P78413 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
IRX4P78413 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
IRX4P78413 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
IRX4P78413 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
IRX4P78413 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.13■□□□□ 0.49
IRX4P78413 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
IRX4P78413 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
IRX4P78413 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.13■□□□□ 0.49
IRX4P78413 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.13■□□□□ 0.49
IRX4P78413 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.13■□□□□ 0.49
IRX4P78413 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.13■□□□□ 0.49
IRX4P78413 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
IRX4P78413 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
IRX4P78413 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
IRX4P78413 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
IRX4P78413 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
IRX4P78413 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.13■□□□□ 0.49
IRX4P78413 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 BX842568.4-201ENST00000421222 227 ntBASIC18.13■□□□□ 0.49
IRX4P78413 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.13■□□□□ 0.49
IRX4P78413 AC132008.2-207ENST00000454517 770 ntBASIC18.13■□□□□ 0.49
IRX4P78413 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.13■□□□□ 0.49
IRX4P78413 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.13■□□□□ 0.49
IRX4P78413 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.13■□□□□ 0.49
IRX4P78413 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.13■□□□□ 0.49
IRX4P78413 AL049840.3-201ENST00000602669 611 ntBASIC18.13■□□□□ 0.49
IRX4P78413 AC008608.2-201ENST00000606089 416 ntBASIC18.13■□□□□ 0.49
IRX4P78413 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
IRX4P78413 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
IRX4P78413 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.13■□□□□ 0.49
IRX4P78413 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.13■□□□□ 0.49
IRX4P78413 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.13■□□□□ 0.49
IRX4P78413 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IRX4P78413 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 SDHAP2-201ENST00000455183 2001 ntBASIC18.12■□□□□ 0.49
IRX4P78413 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms