Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA4AP68366 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
TUBA4AP68366 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
TUBA4AP68366 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA4AP68366 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA4AP68366 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.38■□□□□ 0.21
TUBA4AP68366 FAM210CP-201ENST00000445714 574 ntBASIC16.38■□□□□ 0.21
TUBA4AP68366 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.38■□□□□ 0.21
TUBA4AP68366 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.38■□□□□ 0.21
TUBA4AP68366 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA4AP68366 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.38■□□□□ 0.21
TUBA4AP68366 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.38■□□□□ 0.21
TUBA4AP68366 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA4AP68366 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA4AP68366 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA4AP68366 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA4AP68366 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
TUBA4AP68366 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA4AP68366 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA4AP68366 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA4AP68366 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TUBA4AP68366 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA4AP68366 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA4AP68366 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA4AP68366 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.38■□□□□ 0.21
TUBA4AP68366 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA4AP68366 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA4AP68366 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
TUBA4AP68366 AC073508.3-201ENST00000619697 1419 ntBASIC16.37■□□□□ 0.21
TUBA4AP68366 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA4AP68366 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA4AP68366 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.37■□□□□ 0.21
TUBA4AP68366 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
TUBA4AP68366 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.37■□□□□ 0.21
TUBA4AP68366 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA4AP68366 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA4AP68366 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA4AP68366 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.37■□□□□ 0.21
TUBA4AP68366 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.37■□□□□ 0.21
TUBA4AP68366 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA4AP68366 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TUBA4AP68366 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.37■□□□□ 0.21
TUBA4AP68366 AC005915.1-201ENST00000624912 2018 ntBASIC16.37■□□□□ 0.21
TUBA4AP68366 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA4AP68366 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA4AP68366 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA4AP68366 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA4AP68366 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.37■□□□□ 0.21
TUBA4AP68366 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.37■□□□□ 0.21
TUBA4AP68366 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.37■□□□□ 0.21
TUBA4AP68366 AC141257.4-201ENST00000634557 245 ntBASIC16.37■□□□□ 0.21
TUBA4AP68366 AC136944.6-201ENST00000634818 245 ntBASIC16.37■□□□□ 0.21
TUBA4AP68366 AC092865.7-201ENST00000641832 219 ntBASIC16.37■□□□□ 0.21
TUBA4AP68366 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA4AP68366 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA4AP68366 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA4AP68366 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA4AP68366 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.37■□□□□ 0.21
TUBA4AP68366 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
TUBA4AP68366 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TUBA4AP68366 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.36■□□□□ 0.21
TUBA4AP68366 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.36■□□□□ 0.21
TUBA4AP68366 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.36■□□□□ 0.21
TUBA4AP68366 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.36■□□□□ 0.21
TUBA4AP68366 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.36■□□□□ 0.21
TUBA4AP68366 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
TUBA4AP68366 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.36■□□□□ 0.21
TUBA4AP68366 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.36■□□□□ 0.21
TUBA4AP68366 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.36■□□□□ 0.21
TUBA4AP68366 MIR3180-5-201ENST00000583743 153 ntBASIC16.36■□□□□ 0.21
TUBA4AP68366 AL138966.2-201ENST00000621997 464 ntBASIC16.36■□□□□ 0.21
TUBA4AP68366 AL023973.1-201ENST00000624619 620 ntBASIC16.36■□□□□ 0.21
TUBA4AP68366 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
TUBA4AP68366 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TUBA4AP68366 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.36■□□□□ 0.21
TUBA4AP68366 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.36■□□□□ 0.21
TUBA4AP68366 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TUBA4AP68366 C8orf49-201ENST00000525043 1968 ntBASIC16.36■□□□□ 0.21
TUBA4AP68366 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
TUBA4AP68366 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TUBA4AP68366 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA4AP68366 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms