Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RHBDL3P58872 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.44■□□□□ 0.86
RHBDL3P58872 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.44■□□□□ 0.86
RHBDL3P58872 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.44■□□□□ 0.86
RHBDL3P58872 ACTG1P14-201ENST00000446382 1122 ntBASIC20.44■□□□□ 0.86
RHBDL3P58872 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.44■□□□□ 0.86
RHBDL3P58872 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.44■□□□□ 0.86
RHBDL3P58872 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.44■□□□□ 0.86
RHBDL3P58872 AC027612.4-201ENST00000605371 583 ntBASIC20.44■□□□□ 0.86
RHBDL3P58872 REXO1L3P-201ENST00000622202 1288 ntBASIC20.44■□□□□ 0.86
RHBDL3P58872 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.44■□□□□ 0.86
RHBDL3P58872 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RHBDL3P58872 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RHBDL3P58872 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.43■□□□□ 0.86
RHBDL3P58872 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.43■□□□□ 0.86
RHBDL3P58872 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.43■□□□□ 0.86
RHBDL3P58872 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.43■□□□□ 0.86
RHBDL3P58872 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 SLC25A1P3-201ENST00000395415 828 ntBASIC20.43■□□□□ 0.86
RHBDL3P58872 HMGN1P19-201ENST00000436976 333 ntBASIC20.43■□□□□ 0.86
RHBDL3P58872 METTL21AP1-201ENST00000438852 635 ntBASIC20.43■□□□□ 0.86
RHBDL3P58872 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.43■□□□□ 0.86
RHBDL3P58872 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RHBDL3P58872 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RHBDL3P58872 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.43■□□□□ 0.86
RHBDL3P58872 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.43■□□□□ 0.86
RHBDL3P58872 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.43■□□□□ 0.86
RHBDL3P58872 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.43■□□□□ 0.86
RHBDL3P58872 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RHBDL3P58872 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.43■□□□□ 0.86
RHBDL3P58872 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RHBDL3P58872 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RHBDL3P58872 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDL3P58872 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDL3P58872 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDL3P58872 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RHBDL3P58872 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.42■□□□□ 0.86
RHBDL3P58872 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDL3P58872 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDL3P58872 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDL3P58872 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.42■□□□□ 0.86
RHBDL3P58872 AIRN-201ENST00000601203 4374 ntBASIC20.42■□□□□ 0.86
RHBDL3P58872 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
RHBDL3P58872 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDL3P58872 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDL3P58872 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.42■□□□□ 0.86
RHBDL3P58872 AL355385.1-201ENST00000606123 409 ntBASIC20.42■□□□□ 0.86
RHBDL3P58872 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.42■□□□□ 0.86
RHBDL3P58872 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RHBDL3P58872 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.42■□□□□ 0.86
RHBDL3P58872 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDL3P58872 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDL3P58872 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RHBDL3P58872 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.42■□□□□ 0.86
RHBDL3P58872 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RHBDL3P58872 ADH5P3-201ENST00000433842 1137 ntBASIC20.41■□□□□ 0.86
RHBDL3P58872 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RHBDL3P58872 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RHBDL3P58872 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.41■□□□□ 0.86
RHBDL3P58872 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.41■□□□□ 0.86
RHBDL3P58872 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RHBDL3P58872 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
RHBDL3P58872 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.41■□□□□ 0.86
RHBDL3P58872 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.41■□□□□ 0.86
RHBDL3P58872 AL513210.1-201ENST00000629608 234 ntBASIC20.41■□□□□ 0.86
RHBDL3P58872 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.41■□□□□ 0.86
RHBDL3P58872 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RHBDL3P58872 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RHBDL3P58872 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.41■□□□□ 0.86
RHBDL3P58872 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms