Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.57■□□□□ 0.24
NR1H2P55055 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NR1H2P55055 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.57■□□□□ 0.24
NR1H2P55055 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NR1H2P55055 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.57■□□□□ 0.24
NR1H2P55055 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.56■□□□□ 0.24
NR1H2P55055 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NR1H2P55055 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
NR1H2P55055 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NR1H2P55055 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.56■□□□□ 0.24
NR1H2P55055 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NR1H2P55055 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NR1H2P55055 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NR1H2P55055 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NR1H2P55055 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.56■□□□□ 0.24
NR1H2P55055 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.56■□□□□ 0.24
NR1H2P55055 TSPY5P-201ENST00000426936 936 ntBASIC16.56■□□□□ 0.24
NR1H2P55055 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
NR1H2P55055 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.56■□□□□ 0.24
NR1H2P55055 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
NR1H2P55055 AC006449.5-201ENST00000610658 2098 ntBASIC16.56■□□□□ 0.24
NR1H2P55055 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.56■□□□□ 0.24
NR1H2P55055 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
NR1H2P55055 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H2P55055 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
NR1H2P55055 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
NR1H2P55055 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H2P55055 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NR1H2P55055 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NR1H2P55055 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NR1H2P55055 TSPY26P-202ENST00000565928 3884 ntBASIC16.55■□□□□ 0.24
NR1H2P55055 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H2P55055 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.55■□□□□ 0.24
NR1H2P55055 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.55■□□□□ 0.24
NR1H2P55055 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.55■□□□□ 0.24
NR1H2P55055 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H2P55055 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H2P55055 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H2P55055 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NR1H2P55055 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.55■□□□□ 0.24
NR1H2P55055 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NR1H2P55055 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H2P55055 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.55■□□□□ 0.24
NR1H2P55055 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NR1H2P55055 HOMER2P1-201ENST00000455653 964 ntBASIC16.55■□□□□ 0.24
NR1H2P55055 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.55■□□□□ 0.24
NR1H2P55055 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.55■□□□□ 0.24
NR1H2P55055 KRT18P41-201ENST00000518924 1277 ntBASIC16.55■□□□□ 0.24
NR1H2P55055 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.55■□□□□ 0.24
NR1H2P55055 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.55■□□□□ 0.24
NR1H2P55055 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.55■□□□□ 0.24
NR1H2P55055 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NR1H2P55055 AC140113.3-201ENST00000605663 199 ntBASIC16.55■□□□□ 0.24
NR1H2P55055 AC091076.1-201ENST00000610741 619 ntBASIC16.55■□□□□ 0.24
NR1H2P55055 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NR1H2P55055 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NR1H2P55055 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.55■□□□□ 0.24
NR1H2P55055 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NR1H2P55055 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H2P55055 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NR1H2P55055 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.55■□□□□ 0.24
NR1H2P55055 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H2P55055 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.55■□□□□ 0.24
NR1H2P55055 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H2P55055 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NR1H2P55055 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.55■□□□□ 0.24
NR1H2P55055 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H2P55055 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H2P55055 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H2P55055 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.55■□□□□ 0.24
NR1H2P55055 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H2P55055 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H2P55055 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NR1H2P55055 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.54■□□□□ 0.24
NR1H2P55055 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms