Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA2P52926 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
HMGA2P52926 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA2P52926 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGA2P52926 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGA2P52926 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGA2P52926 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
HMGA2P52926 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGA2P52926 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGA2P52926 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGA2P52926 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGA2P52926 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGA2P52926 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGA2P52926 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGA2P52926 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGA2P52926 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGA2P52926 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGA2P52926 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGA2P52926 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGA2P52926 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGA2P52926 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGA2P52926 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGA2P52926 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGA2P52926 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGA2P52926 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HMGA2P52926 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGA2P52926 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HMGA2P52926 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGA2P52926 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGA2P52926 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGA2P52926 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGA2P52926 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGA2P52926 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGA2P52926 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGA2P52926 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGA2P52926 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGA2P52926 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGA2P52926 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGA2P52926 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HMGA2P52926 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HMGA2P52926 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HMGA2P52926 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
HMGA2P52926 AC125634.1-201ENST00000438758 1403 ntBASIC15.87■□□□□ 0.13
HMGA2P52926 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.87■□□□□ 0.13
HMGA2P52926 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HMGA2P52926 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HMGA2P52926 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.87■□□□□ 0.13
HMGA2P52926 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.87■□□□□ 0.13
HMGA2P52926 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
HMGA2P52926 BX664615.1-201ENST00000443558 458 ntBASIC15.87■□□□□ 0.13
HMGA2P52926 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HMGA2P52926 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.87■□□□□ 0.13
HMGA2P52926 AC010203.1-204ENST00000548782 407 ntBASIC15.87■□□□□ 0.13
HMGA2P52926 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.87■□□□□ 0.13
HMGA2P52926 STK25P1-201ENST00000585406 838 ntBASIC15.87■□□□□ 0.13
HMGA2P52926 AL353801.3-201ENST00000609898 542 ntBASIC15.87■□□□□ 0.13
HMGA2P52926 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.87■□□□□ 0.13
HMGA2P52926 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.87■□□□□ 0.13
HMGA2P52926 FRMD8P1-201ENST00000440433 1524 ntBASIC15.87■□□□□ 0.13
HMGA2P52926 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HMGA2P52926 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.87■□□□□ 0.13
HMGA2P52926 AL391005.1-201ENST00000623953 2435 ntBASIC15.87■□□□□ 0.13
HMGA2P52926 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.87■□□□□ 0.13
HMGA2P52926 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
HMGA2P52926 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HMGA2P52926 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
HMGA2P52926 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HMGA2P52926 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
HMGA2P52926 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.87■□□□□ 0.13
HMGA2P52926 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGA2P52926 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGA2P52926 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGA2P52926 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGA2P52926 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGA2P52926 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGA2P52926 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HMGA2P52926 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms