Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.31■□□□□ 0.36
ZNF140P52738 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF140P52738 AC008608.2-201ENST00000606089 416 ntBASIC17.31■□□□□ 0.36
ZNF140P52738 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ZNF140P52738 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF140P52738 AL356309.3-201ENST00000624132 1934 ntBASIC17.31■□□□□ 0.36
ZNF140P52738 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 AC106820.2-201ENST00000563775 3264 ntBASIC17.31■□□□□ 0.36
ZNF140P52738 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ZNF140P52738 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ZNF140P52738 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
ZNF140P52738 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 AC012313.1-201ENST00000593393 3059 ntBASIC17.3■□□□□ 0.36
ZNF140P52738 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.3■□□□□ 0.36
ZNF140P52738 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF140P52738 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF140P52738 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ZNF140P52738 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ZNF140P52738 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ZNF140P52738 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ZNF140P52738 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.3■□□□□ 0.36
ZNF140P52738 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 PRYP5-201ENST00000451909 266 ntBASIC17.3■□□□□ 0.36
ZNF140P52738 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ZNF140P52738 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 NKAPP1-205ENST00000585790 367 ntBASIC17.3■□□□□ 0.36
ZNF140P52738 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ZNF140P52738 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF140P52738 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF140P52738 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF140P52738 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ZNF140P52738 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF140P52738 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF140P52738 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ZNF140P52738 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF140P52738 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF140P52738 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ZNF140P52738 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.29■□□□□ 0.36
ZNF140P52738 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF140P52738 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF140P52738 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF140P52738 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF140P52738 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF140P52738 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF140P52738 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF140P52738 HTR7P1-202ENST00000624664 4411 ntBASIC17.29■□□□□ 0.36
ZNF140P52738 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF140P52738 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF140P52738 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ZNF140P52738 AF238378.1-201ENST00000526806 358 ntBASIC17.29■□□□□ 0.36
ZNF140P52738 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.29■□□□□ 0.36
ZNF140P52738 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF140P52738 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF140P52738 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF140P52738 AC097637.2-201ENST00000624096 1997 ntBASIC17.29■□□□□ 0.36
ZNF140P52738 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF140P52738 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF140P52738 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF140P52738 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF140P52738 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF140P52738 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF140P52738 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZNF140P52738 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF140P52738 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF140P52738 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF140P52738 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF140P52738 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF140P52738 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF140P52738 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF140P52738 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ZNF140P52738 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF140P52738 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
ZNF140P52738 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF140P52738 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
ZNF140P52738 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF140P52738 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF140P52738 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF140P52738 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF140P52738 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms