Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.26■□□□□ 0.67
BRCA2P51587 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
BRCA2P51587 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRCA2P51587 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRCA2P51587 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.26■□□□□ 0.67
BRCA2P51587 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRCA2P51587 HCG4-201ENST00000418983 998 ntBASIC19.26■□□□□ 0.67
BRCA2P51587 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.26■□□□□ 0.67
BRCA2P51587 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.26■□□□□ 0.67
BRCA2P51587 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.26■□□□□ 0.67
BRCA2P51587 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.26■□□□□ 0.67
BRCA2P51587 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.25■□□□□ 0.67
BRCA2P51587 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCA2P51587 AC093010.1-201ENST00000473625 1624 ntBASIC19.25■□□□□ 0.67
BRCA2P51587 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
BRCA2P51587 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCA2P51587 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRCA2P51587 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
BRCA2P51587 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRCA2P51587 AC009407.1-201ENST00000568958 598 ntBASIC19.25■□□□□ 0.67
BRCA2P51587 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCA2P51587 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCA2P51587 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCA2P51587 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BRCA2P51587 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
BRCA2P51587 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCA2P51587 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.25■□□□□ 0.67
BRCA2P51587 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
BRCA2P51587 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCA2P51587 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRCA2P51587 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.25■□□□□ 0.67
BRCA2P51587 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
BRCA2P51587 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCA2P51587 DGCR5-201ENST00000399539 862 ntBASIC19.25■□□□□ 0.67
BRCA2P51587 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.25■□□□□ 0.67
BRCA2P51587 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCA2P51587 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BRCA2P51587 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.25■□□□□ 0.67
BRCA2P51587 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.25■□□□□ 0.67
BRCA2P51587 RARRES2P8-201ENST00000566335 367 ntBASIC19.25■□□□□ 0.67
BRCA2P51587 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCA2P51587 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
BRCA2P51587 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCA2P51587 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCA2P51587 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRCA2P51587 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.24■□□□□ 0.67
BRCA2P51587 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRCA2P51587 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRCA2P51587 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRCA2P51587 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.24■□□□□ 0.67
BRCA2P51587 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.24■□□□□ 0.67
BRCA2P51587 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRCA2P51587 MIR4453-201ENST00000584019 89 ntBASIC19.24■□□□□ 0.67
BRCA2P51587 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.24■□□□□ 0.67
BRCA2P51587 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.24■□□□□ 0.67
BRCA2P51587 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRCA2P51587 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRCA2P51587 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.24■□□□□ 0.67
BRCA2P51587 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
BRCA2P51587 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.24■□□□□ 0.67
BRCA2P51587 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRCA2P51587 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.24■□□□□ 0.67
BRCA2P51587 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.24■□□□□ 0.67
BRCA2P51587 MIR6080-201ENST00000617359 66 ntBASIC19.24■□□□□ 0.67
BRCA2P51587 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRCA2P51587 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRCA2P51587 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRCA2P51587 AL671277.1-201ENST00000429656 993 ntBASIC19.23■□□□□ 0.67
BRCA2P51587 IGHV3-42-201ENST00000520410 361 ntBASIC19.23■□□□□ 0.67
BRCA2P51587 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.23■□□□□ 0.67
BRCA2P51587 API5-211ENST00000534695 560 ntTSL 5 BASIC19.23■□□□□ 0.67
BRCA2P51587 GPR182-203ENST00000622922 591 ntBASIC19.23■□□□□ 0.67
BRCA2P51587 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCA2P51587 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BRCA2P51587 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCA2P51587 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCA2P51587 AC093677.2-201ENST00000600169 1863 ntBASIC19.23■□□□□ 0.67
BRCA2P51587 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.23■□□□□ 0.67
BRCA2P51587 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.23■□□□□ 0.67
BRCA2P51587 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCA2P51587 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
BRCA2P51587 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.23■□□□□ 0.67
BRCA2P51587 TP53TG3HP-202ENST00000569755 579 ntBASIC19.23■□□□□ 0.67
BRCA2P51587 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.23■□□□□ 0.67
BRCA2P51587 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.23■□□□□ 0.67
BRCA2P51587 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BRCA2P51587 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BRCA2P51587 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCA2P51587 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BRCA2P51587 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.23■□□□□ 0.67
BRCA2P51587 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.23■□□□□ 0.67
BRCA2P51587 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
BRCA2P51587 AC104794.3-201ENST00000566840 1248 ntBASIC19.23■□□□□ 0.67
BRCA2P51587 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCA2P51587 AC004790.1-201ENST00000612686 536 ntBASIC19.23■□□□□ 0.67
BRCA2P51587 REXO1L9P-201ENST00000604264 2108 ntBASIC19.23■□□□□ 0.67
BRCA2P51587 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.23■□□□□ 0.67
BRCA2P51587 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCA2P51587 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
BRCA2P51587 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms