Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CENPAP49450 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CENPAP49450 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.83■□□□□ 0.12
CENPAP49450 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.83■□□□□ 0.12
CENPAP49450 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.83■□□□□ 0.12
CENPAP49450 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.83■□□□□ 0.12
CENPAP49450 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CENPAP49450 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.83■□□□□ 0.12
CENPAP49450 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CENPAP49450 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
CENPAP49450 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CENPAP49450 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CENPAP49450 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CENPAP49450 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CENPAP49450 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CENPAP49450 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CENPAP49450 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CENPAP49450 BX276092.7-203ENST00000637198 1536 ntBASIC15.83■□□□□ 0.12
CENPAP49450 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CENPAP49450 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CENPAP49450 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.83■□□□□ 0.12
CENPAP49450 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.82■□□□□ 0.12
CENPAP49450 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CENPAP49450 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CENPAP49450 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CENPAP49450 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CENPAP49450 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.82■□□□□ 0.12
CENPAP49450 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 AC211429.1-201ENST00000415277 523 ntBASIC15.82■□□□□ 0.12
CENPAP49450 AK4P3-201ENST00000418260 669 ntBASIC15.82■□□□□ 0.12
CENPAP49450 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CENPAP49450 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.82■□□□□ 0.12
CENPAP49450 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CENPAP49450 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.82■□□□□ 0.12
CENPAP49450 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.82■□□□□ 0.12
CENPAP49450 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.82■□□□□ 0.12
CENPAP49450 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 AC046158.3-201ENST00000624947 2558 ntBASIC15.82■□□□□ 0.12
CENPAP49450 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.82■□□□□ 0.12
CENPAP49450 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 AC099398.1-201ENST00000567919 2776 ntBASIC15.82■□□□□ 0.12
CENPAP49450 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.82■□□□□ 0.12
CENPAP49450 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.82■□□□□ 0.12
CENPAP49450 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CENPAP49450 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.82■□□□□ 0.12
CENPAP49450 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CENPAP49450 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.81■□□□□ 0.12
CENPAP49450 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CENPAP49450 RNF152P1-201ENST00000397754 604 ntBASIC15.81■□□□□ 0.12
CENPAP49450 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.81■□□□□ 0.12
CENPAP49450 TSPY5P-201ENST00000426936 936 ntBASIC15.81■□□□□ 0.12
CENPAP49450 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CENPAP49450 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.81■□□□□ 0.12
CENPAP49450 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.81■□□□□ 0.12
CENPAP49450 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.81■□□□□ 0.12
CENPAP49450 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms