Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TNFSF9P41273 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFSF9P41273 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.8■□□□□ 0.6
TNFSF9P41273 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TNFSF9P41273 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.8■□□□□ 0.6
TNFSF9P41273 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFSF9P41273 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFSF9P41273 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
TNFSF9P41273 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TNFSF9P41273 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFSF9P41273 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFSF9P41273 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.8■□□□□ 0.6
TNFSF9P41273 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.8■□□□□ 0.6
TNFSF9P41273 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.8■□□□□ 0.6
TNFSF9P41273 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.8■□□□□ 0.6
TNFSF9P41273 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TNFSF9P41273 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.8■□□□□ 0.6
TNFSF9P41273 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFSF9P41273 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TNFSF9P41273 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFSF9P41273 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.8■□□□□ 0.6
TNFSF9P41273 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF9P41273 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF9P41273 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFSF9P41273 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.79■□□□□ 0.6
TNFSF9P41273 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TNFSF9P41273 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF9P41273 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF9P41273 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF9P41273 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF9P41273 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFSF9P41273 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFSF9P41273 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TNFSF9P41273 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF9P41273 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF9P41273 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.79■□□□□ 0.6
TNFSF9P41273 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TNFSF9P41273 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF9P41273 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.79■□□□□ 0.6
TNFSF9P41273 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFSF9P41273 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.79■□□□□ 0.6
TNFSF9P41273 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF9P41273 AF228730.7-201ENST00000641842 219 ntBASIC18.79■□□□□ 0.6
TNFSF9P41273 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF9P41273 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF9P41273 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.79■□□□□ 0.6
TNFSF9P41273 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TNFSF9P41273 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF9P41273 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TNFSF9P41273 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF9P41273 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF9P41273 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TNFSF9P41273 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TNFSF9P41273 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TNFSF9P41273 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF9P41273 AC141586.5-201ENST00000624546 2050 ntBASIC18.78■□□□□ 0.6
TNFSF9P41273 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFSF9P41273 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF9P41273 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFSF9P41273 AL590787.1-201ENST00000568856 1315 ntBASIC18.78■□□□□ 0.6
TNFSF9P41273 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF9P41273 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF9P41273 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFSF9P41273 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF9P41273 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TNFSF9P41273 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFSF9P41273 SLC25A1P3-201ENST00000395415 828 ntBASIC18.78■□□□□ 0.6
TNFSF9P41273 RPL13AP23-201ENST00000480739 586 ntBASIC18.78■□□□□ 0.6
TNFSF9P41273 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFSF9P41273 AC136632.2-201ENST00000512891 861 ntBASIC18.78■□□□□ 0.6
TNFSF9P41273 RNA5SP415-201ENST00000517246 115 ntBASIC18.78■□□□□ 0.6
TNFSF9P41273 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms