Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCNN1AP37088 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCNN1AP37088 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SCNN1AP37088 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SCNN1AP37088 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCNN1AP37088 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCNN1AP37088 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCNN1AP37088 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCNN1AP37088 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.07■□□□□ 0.48
SCNN1AP37088 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCNN1AP37088 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCNN1AP37088 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.07■□□□□ 0.48
SCNN1AP37088 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.07■□□□□ 0.48
SCNN1AP37088 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCNN1AP37088 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCNN1AP37088 AC004706.3-202ENST00000621574 984 ntBASIC18.07■□□□□ 0.48
SCNN1AP37088 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCNN1AP37088 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
SCNN1AP37088 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCNN1AP37088 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCNN1AP37088 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCNN1AP37088 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCNN1AP37088 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.06■□□□□ 0.48
SCNN1AP37088 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.06■□□□□ 0.48
SCNN1AP37088 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.06■□□□□ 0.48
SCNN1AP37088 AL590787.1-201ENST00000568856 1315 ntBASIC18.06■□□□□ 0.48
SCNN1AP37088 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.06■□□□□ 0.48
SCNN1AP37088 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.06■□□□□ 0.48
SCNN1AP37088 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SCNN1AP37088 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.06■□□□□ 0.48
SCNN1AP37088 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.06■□□□□ 0.48
SCNN1AP37088 AC064862.7-201ENST00000604520 867 ntBASIC18.06■□□□□ 0.48
SCNN1AP37088 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.06■□□□□ 0.48
SCNN1AP37088 TP73-AS1-207ENST00000624167 988 ntBASIC18.06■□□□□ 0.48
SCNN1AP37088 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.06■□□□□ 0.48
SCNN1AP37088 AC107918.4-202ENST00000641623 219 ntBASIC18.06■□□□□ 0.48
SCNN1AP37088 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
SCNN1AP37088 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.06■□□□□ 0.48
SCNN1AP37088 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SCNN1AP37088 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCNN1AP37088 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCNN1AP37088 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCNN1AP37088 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SCNN1AP37088 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.05■□□□□ 0.48
SCNN1AP37088 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SCNN1AP37088 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
SCNN1AP37088 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCNN1AP37088 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SCNN1AP37088 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCNN1AP37088 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCNN1AP37088 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCNN1AP37088 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.05■□□□□ 0.48
SCNN1AP37088 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.05■□□□□ 0.48
SCNN1AP37088 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.05■□□□□ 0.48
SCNN1AP37088 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.05■□□□□ 0.48
SCNN1AP37088 AC018712.1-201ENST00000455767 687 ntBASIC18.05■□□□□ 0.48
SCNN1AP37088 AC073648.2-201ENST00000510116 352 ntBASIC18.05■□□□□ 0.48
SCNN1AP37088 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.05■□□□□ 0.48
SCNN1AP37088 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.05■□□□□ 0.48
SCNN1AP37088 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCNN1AP37088 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.05■□□□□ 0.48
SCNN1AP37088 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.05■□□□□ 0.48
SCNN1AP37088 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
SCNN1AP37088 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCNN1AP37088 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCNN1AP37088 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCNN1AP37088 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCNN1AP37088 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
SCNN1AP37088 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCNN1AP37088 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.05■□□□□ 0.48
SCNN1AP37088 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.05■□□□□ 0.48
SCNN1AP37088 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SCNN1AP37088 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.04■□□□□ 0.48
SCNN1AP37088 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.04■□□□□ 0.48
SCNN1AP37088 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCNN1AP37088 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCNN1AP37088 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCNN1AP37088 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCNN1AP37088 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.04■□□□□ 0.48
SCNN1AP37088 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCNN1AP37088 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCNN1AP37088 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCNN1AP37088 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms