Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP1P29466 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CASP1P29466 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP1P29466 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.46■□□□□ 0.71
CASP1P29466 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.46■□□□□ 0.71
CASP1P29466 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CASP1P29466 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP1P29466 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
CASP1P29466 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CASP1P29466 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.46■□□□□ 0.71
CASP1P29466 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.46■□□□□ 0.71
CASP1P29466 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.46■□□□□ 0.71
CASP1P29466 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP1P29466 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CASP1P29466 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP1P29466 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CASP1P29466 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CASP1P29466 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.46■□□□□ 0.71
CASP1P29466 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.46■□□□□ 0.71
CASP1P29466 AC096582.2-201ENST00000510860 516 ntBASIC19.46■□□□□ 0.71
CASP1P29466 AC009533.2-201ENST00000543664 586 ntBASIC19.46■□□□□ 0.71
CASP1P29466 AC074051.2-201ENST00000565115 352 ntBASIC19.46■□□□□ 0.71
CASP1P29466 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.46■□□□□ 0.71
CASP1P29466 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.46■□□□□ 0.71
CASP1P29466 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CASP1P29466 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.46■□□□□ 0.71
CASP1P29466 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.46■□□□□ 0.71
CASP1P29466 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.46■□□□□ 0.71
CASP1P29466 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CASP1P29466 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP1P29466 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP1P29466 AGGF1P2-201ENST00000426656 2106 ntBASIC19.46■□□□□ 0.71
CASP1P29466 AL353593.2-201ENST00000602529 1483 ntBASIC19.46■□□□□ 0.71
CASP1P29466 UBALD1-205ENST00000590891 2641 ntBASIC19.46■□□□□ 0.71
CASP1P29466 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.46■□□□□ 0.71
CASP1P29466 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP1P29466 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP1P29466 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP1P29466 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CASP1P29466 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP1P29466 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.46■□□□□ 0.71
CASP1P29466 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP1P29466 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.45■□□□□ 0.7
CASP1P29466 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP1P29466 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP1P29466 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP1P29466 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CASP1P29466 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CASP1P29466 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP1P29466 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP1P29466 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CASP1P29466 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP1P29466 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP1P29466 AP000867.3-201ENST00000524675 377 ntBASIC19.45■□□□□ 0.7
CASP1P29466 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CASP1P29466 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.45■□□□□ 0.7
CASP1P29466 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP1P29466 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CASP1P29466 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CASP1P29466 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CASP1P29466 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.45■□□□□ 0.7
CASP1P29466 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP1P29466 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.45■□□□□ 0.7
CASP1P29466 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CASP1P29466 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CASP1P29466 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.44■□□□□ 0.7
CASP1P29466 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CASP1P29466 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASP1P29466 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CASP1P29466 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.44■□□□□ 0.7
CASP1P29466 MIR1224-201ENST00000408193 85 ntBASIC19.44■□□□□ 0.7
CASP1P29466 MINOS1P3-201ENST00000457048 203 ntBASIC19.44■□□□□ 0.7
CASP1P29466 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.44■□□□□ 0.7
CASP1P29466 VENTXP7-201ENST00000475503 772 ntBASIC19.44■□□□□ 0.7
CASP1P29466 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.44■□□□□ 0.7
CASP1P29466 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.44■□□□□ 0.7
CASP1P29466 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.44■□□□□ 0.7
CASP1P29466 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CASP1P29466 INTS4P1-201ENST00000438455 1935 ntBASIC19.44■□□□□ 0.7
CASP1P29466 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASP1P29466 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.44■□□□□ 0.7
CASP1P29466 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASP1P29466 AC092068.3-201ENST00000587894 2016 ntBASIC19.44■□□□□ 0.7
CASP1P29466 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASP1P29466 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.44■□□□□ 0.7
CASP1P29466 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CASP1P29466 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASP1P29466 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CASP1P29466 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP1P29466 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CASP1P29466 AC079328.2-201ENST00000561241 3354 ntBASIC19.43■□□□□ 0.7
CASP1P29466 LINC02012-201ENST00000608206 1725 ntBASIC19.43■□□□□ 0.7
CASP1P29466 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP1P29466 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.43■□□□□ 0.7
CASP1P29466 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.43■□□□□ 0.7
CASP1P29466 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.43■□□□□ 0.7
CASP1P29466 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP1P29466 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP1P29466 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
CASP1P29466 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms