Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MSR1P21757 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.42■□□□□ 0.06
MSR1P21757 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
MSR1P21757 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MSR1P21757 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
MSR1P21757 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.42■□□□□ 0.06
MSR1P21757 NSUN5P1-202ENST00000421140 1535 ntBASIC15.42■□□□□ 0.06
MSR1P21757 NSUN5P2-203ENST00000457352 1529 ntBASIC15.42■□□□□ 0.06
MSR1P21757 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MSR1P21757 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MSR1P21757 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MSR1P21757 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
MSR1P21757 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MSR1P21757 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MSR1P21757 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
MSR1P21757 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
MSR1P21757 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MSR1P21757 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MSR1P21757 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MSR1P21757 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MSR1P21757 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MSR1P21757 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
MSR1P21757 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.41■□□□□ 0.06
MSR1P21757 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.41■□□□□ 0.06
MSR1P21757 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 AL049757.1-201ENST00000616842 1596 ntBASIC15.41■□□□□ 0.06
MSR1P21757 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MSR1P21757 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
MSR1P21757 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.41■□□□□ 0.06
MSR1P21757 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.41■□□□□ 0.06
MSR1P21757 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.41■□□□□ 0.06
MSR1P21757 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
MSR1P21757 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.41■□□□□ 0.06
MSR1P21757 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.41■□□□□ 0.06
MSR1P21757 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.41■□□□□ 0.06
MSR1P21757 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.41■□□□□ 0.06
MSR1P21757 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.41■□□□□ 0.06
MSR1P21757 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
MSR1P21757 AC104819.1-201ENST00000504587 486 ntBASIC15.41■□□□□ 0.06
MSR1P21757 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.41■□□□□ 0.06
MSR1P21757 AC096582.2-201ENST00000510860 516 ntBASIC15.41■□□□□ 0.06
MSR1P21757 AP000867.3-201ENST00000524675 377 ntBASIC15.41■□□□□ 0.06
MSR1P21757 AC074051.2-201ENST00000565115 352 ntBASIC15.41■□□□□ 0.06
MSR1P21757 MIR3180-1-201ENST00000580374 94 ntBASIC15.41■□□□□ 0.06
MSR1P21757 MIR3180-3-201ENST00000584616 94 ntBASIC15.41■□□□□ 0.06
MSR1P21757 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MSR1P21757 NPAP1P7-201ENST00000613027 823 ntBASIC15.41■□□□□ 0.06
MSR1P21757 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
MSR1P21757 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
MSR1P21757 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.41■□□□□ 0.06
MSR1P21757 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.41■□□□□ 0.06
MSR1P21757 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSR1P21757 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.41■□□□□ 0.06
MSR1P21757 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.4■□□□□ 0.06
MSR1P21757 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSR1P21757 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
MSR1P21757 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
MSR1P21757 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MSR1P21757 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.4■□□□□ 0.06
MSR1P21757 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSR1P21757 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MSR1P21757 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSR1P21757 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MSR1P21757 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSR1P21757 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSR1P21757 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.4■□□□□ 0.06
MSR1P21757 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.4■□□□□ 0.06
MSR1P21757 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.4■□□□□ 0.06
MSR1P21757 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MSR1P21757 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSR1P21757 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MSR1P21757 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSR1P21757 IGHV3-47-201ENST00000425060 335 ntBASIC15.4■□□□□ 0.06
MSR1P21757 ATP5G2P1-201ENST00000433580 426 ntBASIC15.4■□□□□ 0.06
MSR1P21757 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.4■□□□□ 0.06
MSR1P21757 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSR1P21757 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSR1P21757 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.4■□□□□ 0.06
MSR1P21757 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.4■□□□□ 0.06
MSR1P21757 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.4■□□□□ 0.06
MSR1P21757 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MSR1P21757 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.4■□□□□ 0.06
MSR1P21757 KRT8P10-201ENST00000450021 1447 ntBASIC15.4■□□□□ 0.06
MSR1P21757 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.4■□□□□ 0.06
MSR1P21757 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.4■□□□□ 0.06
MSR1P21757 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms