Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.18■□□□□ 0.18
PRKCAP17252 NPAP1P7-201ENST00000613027 823 ntBASIC16.18■□□□□ 0.18
PRKCAP17252 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PRKCAP17252 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PRKCAP17252 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.18■□□□□ 0.18
PRKCAP17252 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PRKCAP17252 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.18■□□□□ 0.18
PRKCAP17252 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PRKCAP17252 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRKCAP17252 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PRKCAP17252 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PRKCAP17252 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 LINC00554-201ENST00000564841 3011 ntBASIC16.17■□□□□ 0.18
PRKCAP17252 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PRKCAP17252 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.17■□□□□ 0.18
PRKCAP17252 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PRKCAP17252 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.17■□□□□ 0.18
PRKCAP17252 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 UPK3BP1-201ENST00000428678 509 ntBASIC16.17■□□□□ 0.18
PRKCAP17252 ATP5G2P1-201ENST00000433580 426 ntBASIC16.17■□□□□ 0.18
PRKCAP17252 DDX43P3-201ENST00000441064 443 ntBASIC16.17■□□□□ 0.18
PRKCAP17252 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.17■□□□□ 0.18
PRKCAP17252 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.17■□□□□ 0.18
PRKCAP17252 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PRKCAP17252 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.17■□□□□ 0.18
PRKCAP17252 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PRKCAP17252 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.17■□□□□ 0.18
PRKCAP17252 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PRKCAP17252 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRKCAP17252 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
PRKCAP17252 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.16■□□□□ 0.18
PRKCAP17252 OR6D1P-203ENST00000641209 4860 ntBASIC16.16■□□□□ 0.18
PRKCAP17252 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.16■□□□□ 0.18
PRKCAP17252 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PRKCAP17252 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.16■□□□□ 0.18
PRKCAP17252 VENTXP7-201ENST00000475503 772 ntBASIC16.16■□□□□ 0.18
PRKCAP17252 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.16■□□□□ 0.18
PRKCAP17252 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.16■□□□□ 0.18
PRKCAP17252 MIR3180-1-201ENST00000580374 94 ntBASIC16.16■□□□□ 0.18
PRKCAP17252 MIR3180-3-201ENST00000584616 94 ntBASIC16.16■□□□□ 0.18
PRKCAP17252 AC005336.2-201ENST00000593183 939 ntBASIC16.16■□□□□ 0.18
PRKCAP17252 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.16■□□□□ 0.18
PRKCAP17252 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.16■□□□□ 0.18
PRKCAP17252 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 AC093458.2-201ENST00000623150 629 ntBASIC16.16■□□□□ 0.18
PRKCAP17252 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PRKCAP17252 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.16■□□□□ 0.18
PRKCAP17252 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.16■□□□□ 0.18
PRKCAP17252 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRKCAP17252 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms