Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL3L1P16619 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.39□□□□□ -0.11
CCL3L1P16619 MTDHP3-201ENST00000594186 672 ntBASIC14.39□□□□□ -0.11
CCL3L1P16619 AC008608.2-201ENST00000606089 416 ntBASIC14.39□□□□□ -0.11
CCL3L1P16619 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL3L1P16619 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CCL3L1P16619 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCL3L1P16619 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL3L1P16619 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CCL3L1P16619 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL3L1P16619 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL3L1P16619 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCL3L1P16619 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CCL3L1P16619 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL3L1P16619 AC148477.5-201ENST00000625164 1645 ntBASIC14.38□□□□□ -0.11
CCL3L1P16619 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CCL3L1P16619 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.38□□□□□ -0.11
CCL3L1P16619 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.38□□□□□ -0.11
CCL3L1P16619 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL3L1P16619 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL3L1P16619 SAPCD2P3-201ENST00000455031 850 ntBASIC14.38□□□□□ -0.11
CCL3L1P16619 EMBP1-201ENST00000458200 901 ntBASIC14.38□□□□□ -0.11
CCL3L1P16619 AC106795.1-205ENST00000512851 1056 ntBASIC14.38□□□□□ -0.11
CCL3L1P16619 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.38□□□□□ -0.11
CCL3L1P16619 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CCL3L1P16619 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCL3L1P16619 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL3L1P16619 LETM1P2-201ENST00000597330 2178 ntBASIC14.38□□□□□ -0.11
CCL3L1P16619 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CCL3L1P16619 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 AC009336.1-201ENST00000608941 1553 ntBASIC14.38□□□□□ -0.11
CCL3L1P16619 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.38□□□□□ -0.11
CCL3L1P16619 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCL3L1P16619 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCL3L1P16619 AC004817.3-201ENST00000602957 2129 ntBASIC14.38□□□□□ -0.11
CCL3L1P16619 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3L1P16619 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL3L1P16619 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL3L1P16619 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3L1P16619 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL3L1P16619 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3L1P16619 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3L1P16619 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3L1P16619 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3L1P16619 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3L1P16619 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL3L1P16619 SPDYE21P-201ENST00000413323 827 ntBASIC14.37□□□□□ -0.11
CCL3L1P16619 RBM17P3-201ENST00000417687 1192 ntBASIC14.37□□□□□ -0.11
CCL3L1P16619 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL3L1P16619 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL3L1P16619 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3L1P16619 BX005266.1-201ENST00000473402 457 ntBASIC14.37□□□□□ -0.11
CCL3L1P16619 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3L1P16619 AF238378.1-201ENST00000526806 358 ntBASIC14.37□□□□□ -0.11
CCL3L1P16619 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.37□□□□□ -0.11
CCL3L1P16619 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL3L1P16619 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.37□□□□□ -0.11
CCL3L1P16619 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL3L1P16619 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.37□□□□□ -0.11
CCL3L1P16619 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL3L1P16619 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.37□□□□□ -0.11
CCL3L1P16619 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL3L1P16619 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3L1P16619 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.37□□□□□ -0.11
CCL3L1P16619 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCL3L1P16619 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.37□□□□□ -0.11
CCL3L1P16619 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCL3L1P16619 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCL3L1P16619 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.37□□□□□ -0.11
CCL3L1P16619 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3L1P16619 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms